Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq9 86.0 6e-12
>seq9
Length=1212739
Score = 86.0 bits (94), Expect = 6e-12
Identities = 336/517 (65%), Gaps = 16/517 (3%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||||||||| | ||| | || ||||||||||| || || || | || || || || |
Sbjct 165759 TTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTCT 165700
Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGA-GTACCCCAGTTCCGTAA 16028
|||| || || || || || | || || | | ||| | || |||| | |
Sbjct 165699 CCATGAAGTCGAATGGGTTGGCAGACTTGTAGA---CTTTGTCGTTACCCAAAGCAACCA 165643
Query 16029 CTAATCTATCTGCTACAAATTCTATATATTGACACATTA-AGTCGCAATTAATTCCTATA 16087
| | ||| || || || || || ||||| ||| | ||| | | || || |||| |
Sbjct 165642 GCAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAG-AGTTCATGCCTAAA 165584
Query 16088 AGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATG 16147
|| |||||||| | || || |||| |||||| || |||| ||||| |||||
Sbjct 165583 AGAGAGCAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATG 165524
Query 16148 ATATC---GGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACAC 16204
| ||| | |||| ||||| || || || || || || || | || ||
Sbjct 165523 ACATCTTGGACGGCT--TGTTTG-GATGGGCGGTGCTTGAGATGAGAGAATAGGAGGCAT 165467
Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264
||||| ||| || || ||||| || | | ||| ||||||||||| || || | ||
Sbjct 165466 GCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCA 165407
Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324
| ||| || || || || | |||||| || | ||||| || || || ||||| |||
Sbjct 165406 GCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATA 165347
Query 16325 CCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT-TTATTACGAAT 16383
|| ||||||| || || || | | |||| || | |||| | || |||| |||
Sbjct 165346 CCTTCAACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAG-AGCTCTTATCTTCAAT 165288
Query 16384 CCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAA 16420
|||||| |||| ||||| |||| || || |||
Sbjct 165287 CCATTTGACAGCCCAATCGGCCTTTTTCTTAATGCAA 165251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511410417360360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |