Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 6e-12 >seq9 Length=1212739 Score = 86.0 bits (94), Expect = 6e-12 Identities = 336/517 (65%), Gaps = 16/517 (3%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||||||||| | ||| | || ||||||||||| || || || | || || || || | Sbjct 165759 TTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTCT 165700 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGA-GTACCCCAGTTCCGTAA 16028 |||| || || || || || | || || | | ||| | || |||| | | Sbjct 165699 CCATGAAGTCGAATGGGTTGGCAGACTTGTAGA---CTTTGTCGTTACCCAAAGCAACCA 165643 Query 16029 CTAATCTATCTGCTACAAATTCTATATATTGACACATTA-AGTCGCAATTAATTCCTATA 16087 | | ||| || || || || || ||||| ||| | ||| | | || || |||| | Sbjct 165642 GCAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAG-AGTTCATGCCTAAA 165584 Query 16088 AGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATG 16147 || |||||||| | || || |||| |||||| || |||| ||||| ||||| Sbjct 165583 AGAGAGCAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATG 165524 Query 16148 ATATC---GGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACAC 16204 | ||| | |||| ||||| || || || || || || || | || || Sbjct 165523 ACATCTTGGACGGCT--TGTTTG-GATGGGCGGTGCTTGAGATGAGAGAATAGGAGGCAT 165467 Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264 ||||| ||| || || ||||| || | | ||| ||||||||||| || || | || Sbjct 165466 GCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCA 165407 Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324 | ||| || || || || | |||||| || | ||||| || || || ||||| ||| Sbjct 165406 GCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATA 165347 Query 16325 CCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT-TTATTACGAAT 16383 || ||||||| || || || | | |||| || | |||| | || |||| ||| Sbjct 165346 CCTTCAACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAG-AGCTCTTATCTTCAAT 165288 Query 16384 CCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAA 16420 |||||| |||| ||||| |||| || || ||| Sbjct 165287 CCATTTGACAGCCCAATCGGCCTTTTTCTTAATGCAA 165251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511410417360360