Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq15 87.8 1e-12
>seq15
Length=937851
Score = 87.8 bits (96), Expect = 1e-12
Identities = 209/312 (67%), Gaps = 8/312 (3%)
Strand=Plus/Minus
Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926
||||||||||| || | ||||||||| || ||| |||| ||| |||| |||
Sbjct 876590 ACATAAAATTGCGCAAACATATGACAAGGTGGTAACGCCATCAACTTAATATCTGCCACA 876531
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
||||| |||| | | || || ||||| ||||| || ||| || || || ||
Sbjct 876530 TTCCATGCACTTAGAATAATTCTCCTATCCCATGGGTTA-TTCTTA-AGCTTCCAT--AC 876475
Query 101987 TGTTTT----AATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTC 102042
||| | ||| ||||| |||| |||| ||||||| | || | | ||||
Sbjct 876474 AATTTCCGCCAGTTGATCAACACCTTGTCCTGTATAATCTGTTTCGGCATCAATGTATTT 876415
Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTC 102102
|| |||||||| | ||| || || ||||||||||| || | ||||||||| ||| |
Sbjct 876414 AGCGCCGAAATGTCGCCATTGGAAACCATACACAGGACCTAAATCTCCTTCGGCTCGATG 876355
Query 102103 ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162
| | | ||||| ||||| ||| | ||||||||| ||||||| || | | |||
Sbjct 876354 AGATAGACCAATCGAATCTAGGTATGCGCGGGATCCATTCCCATCCCAGATTTTAATGCC 876295
Query 102163 AGCTGCTGATAG 102174
|| || || ||
Sbjct 876294 GGCGGCAGAGAG 876283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361248457087373
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |