Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq15 87.8 1e-12 >seq15 Length=937851 Score = 87.8 bits (96), Expect = 1e-12 Identities = 209/312 (67%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 ||||||||||| || | ||||||||| || ||| |||| ||| |||| ||| Sbjct 876590 ACATAAAATTGCGCAAACATATGACAAGGTGGTAACGCCATCAACTTAATATCTGCCACA 876531 Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 ||||| |||| | | || || ||||| ||||| || ||| || || || || Sbjct 876530 TTCCATGCACTTAGAATAATTCTCCTATCCCATGGGTTA-TTCTTA-AGCTTCCAT--AC 876475 Query 101987 TGTTTT----AATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTC 102042 ||| | ||| ||||| |||| |||| ||||||| | || | | |||| Sbjct 876474 AATTTCCGCCAGTTGATCAACACCTTGTCCTGTATAATCTGTTTCGGCATCAATGTATTT 876415 Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTC 102102 || |||||||| | ||| || || ||||||||||| || | ||||||||| ||| | Sbjct 876414 AGCGCCGAAATGTCGCCATTGGAAACCATACACAGGACCTAAATCTCCTTCGGCTCGATG 876355 Query 102103 ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 | | | ||||| ||||| ||| | ||||||||| ||||||| || | | ||| Sbjct 876354 AGATAGACCAATCGAATCTAGGTATGCGCGGGATCCATTCCCATCCCAGATTTTAATGCC 876295 Query 102163 AGCTGCTGATAG 102174 || || || || Sbjct 876294 GGCGGCAGAGAG 876283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361248457087373