Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq3 282 5e-71
seq9 140 4e-28
>seq3
Length=2126074
Score = 282 bits (312), Expect = 5e-71
Identities = 1319/2067 (64%), Gaps = 53/2067 (3%)
Strand=Plus/Plus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
||||||||||| || || || || | | ||||||| |||||||||||| || || | |
Sbjct 690537 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 690596
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927
|| | ||||||| ||| |||||| ||| | ||| | ||||| ||
Sbjct 690597 CCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 690656
Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987
|| || ||||| |||||| ||||||||| || || || | || |||||||||| |
Sbjct 690657 TGAATGTTCATTGATTGAGATTGATCGATAAATGCACCGCGATCAGCAGCCATTTGAACA 690716
Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047
|| || ||| | ||||||||||| ||| || |||| ||| || || |||||| |
Sbjct 690717 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 690776
Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104
|| | | || ||||||||||||||||| | || || | ||||| || | ||| |
Sbjct 690777 TTGGGGATGTTTTGAATAGATCCACCATCAGCAATGATACGGTTCTTCATGTTGTCAGAC 690836
Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164
|| | | || | || | ||||| || ||||| ||||| ||||||||
Sbjct 690837 CAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATGGGTTAACAACTTGGAATTCTCCG 690896
Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224
| || || | || | ||| || || || || ||||| | | | || || ||
Sbjct 690897 GCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACATTCGTTGAAACCG 690956
Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284
| ||||| | ||| ||||| ||||||||||| || | | | || | || |||
Sbjct 690957 AGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGAGTTGCGAATTCCG 691016
Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 53344
| | |||| | || | || ||||||| ||| | ||| || || ||
Sbjct 691017 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGAAGGAGTGACGCCC 691076
Query 53345 NNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGTA 53400
||| || ||| || ||||| | | ||| || || |||||
Sbjct 691077 CACATGTCATATTGGAGTTCACCCTTGGAGACTGGAG----AGCCTTGGTAAGTTTCGTA 691132
Query 53401 TGGTCC---TTCCTTCTC-AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 53456
|| || |||||| | | || | ||| | || || ||| ||| || ||||
Sbjct 691133 CGGGCCAAGTTCCTTTGCGATCTCG---ACAGATGAGGTC-AAGGCAGCGTGGTAGATGG 691188
Query 53457 TTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTA-TCAAATGGATAATTTAA 53514
| || || |||| | || || | |||| ||||| ||| | || |||||| | ||
Sbjct 691189 TCTCAAAAATCTGGATGTTGAGGTGCTTG-GCTTCT-GGCGAGTCGAATGGAAGACG-AA 691245
Query 53515 GAG--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 53572
||| || ||| || || || | ||||||||||||| | ||||||||| ||| | |
Sbjct 691246 GAGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAA 691304
Query 53573 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTT 53632
|| || |||||| | | |||||||| || ||||| || || || || | ||||
Sbjct 691305 TTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTT 691364
Query 53633 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATC-----TA 53687
|| || | |||| ||| || || | || || | |||||| | ||| || |
Sbjct 691365 CTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATG 691424
Query 53688 TT-AC-AAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 53745
|| || ||| || | | ||||| || |||| ||||| || ||||||| | |
Sbjct 691425 TTGACGAAAGTTGGTAGA-GCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGC 691483
Query 53746 CGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTG 53805
| || | | ||||| ||||| | || | || || || | || | |||
Sbjct 691484 AGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTG 691543
Query 53806 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTG 53865
|| ||||| ||||| || ||||| || ||||| ||||| || | || ||||| | ||
Sbjct 691544 GTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGTTTG 691603
Query 53866 GGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTC 53925
| || | ||| | | ||||| ||||||| || || ||| | |||| |
Sbjct 691604 AGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTTCC 691660
Query 53926 TC---TTTCGTATAGTGTA-TACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATC 53981
| |||| || | | | || | |||||||| || || |||||| |||| |
Sbjct 691661 TGCCTTTTCATA-ACTCTCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAAC 691719
Query 53982 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 54041
|||| ||||||| || ||||| | | ||| ||||| | | | || || ||||| |
Sbjct 691720 CAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCTTCATGA 691779
Query 54042 AGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100
| | |||||||||||| | || ||| || ||||| | | | | ||| || || ||
Sbjct 691780 ACAAATCAGGAATCCACAAGGC-ATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACCG 691838
Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160
||||| ||||| || ||| | | || ||| | |||||| || || | ||| |
Sbjct 691839 TGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACA 691898
Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220
| | | | || || |||||||| || |||||||| | ||||| || ||||| || ||
Sbjct 691899 GCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTTGAAA 691958
Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280
|||| | ||| |||| |||||||||||| ||||| || |||| ||| || |||
Sbjct 691959 ACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGCACCA 692018
Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340
| ||||| || | ||| ||||| || || || || | || ||||| | ||
Sbjct 692019 GTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCA 692078
Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400
|| || || ||||| ||||| || || |||||||| || |||||| | || ||
Sbjct 692079 CAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAG 692138
Query 54401 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 54460
|| || | ||| | ||| |||||| ||| | || || ||||| || |||
Sbjct 692139 CACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGTA 692198
Query 54461 AACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATTGATG 54519
|| | || | || | | ||||| || |||||||| || ||||| || | ||
Sbjct 692199 AAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCG-TG 692257
Query 54520 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 54579
||| || || || |||||||| | ||| || ||||| | || | | || | |
Sbjct 692258 AATACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACCATCAAG 692317
Query 54580 TTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 54637
| | || ||| || | || || || || || || | ||| ||||| ||
Sbjct 692318 ACGTAAAAGATATGATCGCTCAAGGGTCTTGAACCCGAAGTATTGGTAGTTGAAA--TCC 692375
Query 54638 CGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTA 54697
|| || || | |||| | |||||||||| |||| || | | | || || | ||
Sbjct 692376 CGGTCATAGACAATAGCAGAGTTGAGTTCTTCCTCATGTCTCATGACGCATTCGAAAGT- 692434
Query 54698 ATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATC 54756
| |||| ||| || |||||| ||| |||||||| || || ||| | |||||||
Sbjct 692435 TTCCTTGCTAATCATAGGAGAAGCTTTGCCATTTTTTGGGTTTGTATATTGGTATAAATC 692494
Query 54757 CTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCT 54816
|| || | || | || || |||| |||||| || |||||||| || || |
Sbjct 692495 GCGGATAACGTGGGAGAACTGCTTCTTGGTTTGTTTGTGGAGGTTTGATACTGCAATACG 692554
Query 54817 AGCGGCTAGAATGGCATAATCCGGATG 54843
||| ||||||||||||||||| |||||
Sbjct 692555 AGCAGCTAGAATGGCATAATCGGGATG 692581
>seq9
Length=1212739
Score = 140 bits (154), Expect = 4e-28
Identities = 341/514 (66%), Gaps = 7/514 (1%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| || || || | || ||||| || || || || || | || || || ||
Sbjct 165760 TTTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 165701
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963
|||||||| ||| |||| |||| | || |||| | | | ||||| || | |
Sbjct 165700 TCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCCAAAGCAACCAGC 165641
Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 24023
| | ||| ||||| ||||| || ||| ||||| | | | ||||| |||| |||
Sbjct 165640 AGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAAAGA 165581
Query 24024 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 24083
||||||||| | || | ||||||||||| || || || || || || | |
Sbjct 165580 GAGCAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACA 165521
Query 24084 GATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 24141
|||| || | || || || | | | | ||| || | | |||||||
Sbjct 165520 --TCTTGGACGGCTTGTTTGGATGGGCGGTGCTTGAGATGAGAGAATAGGAGGCATGCGA 165463
Query 24142 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 24201
||||| ||| ||||| || || | || | ||||||||| || |||||||| | ||
Sbjct 165462 AATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCA 165403
Query 24202 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 24261
| || ||||||||||| ||||| || || || ||||| |||||||| ||||| || ||||
Sbjct 165402 TGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTT 165343
Query 24262 CTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT---ATCCACT 24318
| || || || || |||| || | || || | | ||| | || | ||||| |
Sbjct 165342 CAACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCAATCCATT 165283
Query 24319 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352
| ||||||||||||||| || || | |||||
Sbjct 165282 TGACAGCCCAATCGGCCTTTTTCTTAATGCAAGG 165249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593716976393040
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