Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq18 131 3e-25 seq15 104 4e-17 >seq18 Length=877782 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || || || || || ||| ||||| |||| | Sbjct 575576 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACAATCACTTTAGAGGTTGAGTCGTCG 575517 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | || || |||||||| ||||| ||||| |||||||| ||| Sbjct 575516 GATACCATCGACAATGTGAAGGCTAAGATTCAAGACAAAGAGGGTATCCCACCTGACCAA 575457 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| || || ||| | |||||| | ||||| | || || || Sbjct 575456 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 575397 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||||||||| |||||||| | ||| | || |||||||| Sbjct 575396 ATCCAAAAAGAATCAACTTTACATTTGGTCCTTCGTCTTCGTGGTGGTAT 575347 Score = 100 bits (110), Expect = 4e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | || || || ||||| || ||||| | ||| | Sbjct 575348 ATGCAAATCTTTGTTAAGACCTTGACTGGAAAGACTATCACATTAGAGGTAGAATCTTCG 575289 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| |||| | || || ||||| ||||| || || || |||||||||||| Sbjct 575288 GATACTATTGATAATGTCAAGGCTAAGATTCAGGATAAGGAGGGCATTCCACCTGATCAA 575229 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || || || ||||| || || ||||| | |||| | ||||| || Sbjct 575228 CAGCGATTGATCTTCGCTGGAAAGCAGTTGGAGGACGGCAGAACTCTTTTGGATTACAAC 575169 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||||| ||| || ||||| ||||| | ||| | || |||||| Sbjct 575168 ATTCAAAAGGAAAGCACCTTGCACTTGGTGCTCCGTCTTCGTGGTGGT 575121 >seq15 Length=937851 Score = 104 bits (114), Expect = 4e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 205561 ACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGA 205620 |||| |||||| |||| |||||||||||||| |||| | || |||| | Sbjct 876590 ACATAAAATTGCGCAAACATATGACAAGGTGGTAACGCCATCAACTTAATATCTGCCACA 876531 Query 205621 TTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATA 205680 ||||| || ||| || || | ||| || ||||| || | || || ||| Sbjct 876530 TTCCATGCACTTAGAATAATTCTCCTATCCCATGGGTTATTCTTAAGCTTCCATACAATT 876471 Query 205681 TGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCA 205740 | | | |||||||| ||||| |||||||| ||| || |||||| |||||||| Sbjct 876470 TCCGCCAGTTGATCAACACCTTGTCCTGTATAATCTGTTTCGGCATCAATGTATTTAGCG 876411 Query 205741 CCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTC 205787 || ||||| |||||||| |||||||| || ||||||||||| ||||| Sbjct 876410 CCGAAATGTCGCCATTGGAAACCATACACAGGACCTAAATCTCCTTC 876364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755450116886400