Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq18 109 6e-19
seq34 102 9e-17
>seq18
Length=877782
Score = 109 bits (120), Expect = 6e-19
Identities = 166/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010
||||| || || | | ||| | |||||| ||||| ||||| ||||||||||| ||||||
Sbjct 575116 TATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAA 575175
Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070
|| ||||| | |||| || | |||||| |||||||| || | |||||| || ||
Sbjct 575176 TCCAAAAGAGTTCTGCCGTCCTCCAACTGCTTTCCAGCGAAGATCAATCGCTGTTGATCA 575235
Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA 43129
| || | || |||||| ||| ||| | || | |||| | | | || || ||
Sbjct 575236 GGTGGAATGCCCTCCTTATCC-TGAATCTTAGCCTTGACATTATCAATAGTATCCGAAGA 575294
Query 43130 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || | ||||| || || || || | ||||| ||||||||||||||
Sbjct 575295 TTCTACCTCTAATGTGATAGTCTTTCCAGTCAAGGTCTTAACAAAGATTTGCAT 575348
>seq34
Length=376069
Score = 102 bits (112), Expect = 9e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| |||||||| || | ||| ||||||||| || ||||| || | || || || |
Sbjct 166316 ACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCC 166375
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || || ||||| || ||||| || | |||||| ||||||| || | | ||||||
Sbjct 166376 ATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTT 166435
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
||| ||| || |||| | | | ||||| || || || |||| |||||
Sbjct 166436 GTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 166495
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||||||||| || ||||| || ||||| |||||
Sbjct 166496 AGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 166531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571813146970440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |