Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq18 95.1 8e-15
seq34 86.0 4e-12
>seq18
Length=877782
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||| |||||||| |||||| || |||||||||||||| || ||| | ||
Sbjct 575365 AGGACCAAATGTAAAGTTGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCC 575424
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||| || || || || || || || ||||| || | | ||| |||||
Sbjct 575425 TCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCCTCTTTGTCT 575484
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | ||| | ||| || || || | ||||| ||
Sbjct 575485 TGAATCTTAGCCTTCACATTGTCGATGGTATCCGACGACTCAACCTCTAAAGTGATTGTC 575544
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| ||||||||||| || || |||||||||||
Sbjct 575545 TTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 575576
>seq34
Length=376069
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34180 CACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTC 34239
||||| ||| | ||| || || || |||||||||||||| || ||| | || ||
Sbjct 166322 CACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTC 166381
Query 34240 CAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGC 34299
| ||||| || ||||| || | ||||| |||||| || | | |||||||||
Sbjct 166382 GAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCTTG 166441
Query 34300 TATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTT 34359
||||| ||| | || | | || | || | || || || || | ||||| |||||
Sbjct 166442 GATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGTTTT 166501
Query 34360 GCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||| ||||| || || || |||||||||||
Sbjct 166502 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 166531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323069546974880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |