Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq18 95.1 8e-15 seq34 86.0 4e-12 >seq18 Length=877782 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| |||||||| |||||| || |||||||||||||| || ||| | || Sbjct 575365 AGGACCAAATGTAAAGTTGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCC 575424 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||| || || || || || || || ||||| || | | ||| ||||| Sbjct 575425 TCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCCTCTTTGTCT 575484 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | ||| | ||| || || || | ||||| || Sbjct 575485 TGAATCTTAGCCTTCACATTGTCGATGGTATCCGACGACTCAACCTCTAAAGTGATTGTC 575544 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||||||||| || || ||||||||||| Sbjct 575545 TTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 575576 >seq34 Length=376069 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34180 CACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTC 34239 ||||| ||| | ||| || || || |||||||||||||| || ||| | || || Sbjct 166322 CACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTC 166381 Query 34240 CAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGC 34299 | ||||| || ||||| || | ||||| |||||| || | | ||||||||| Sbjct 166382 GAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCTTG 166441 Query 34300 TATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTT 34359 ||||| ||| | || | | || | || | || || || || | ||||| ||||| Sbjct 166442 GATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGTTTT 166501 Query 34360 GCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| ||||| || || || ||||||||||| Sbjct 166502 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 166531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069546974880