Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq15 96.9 3e-15
>seq15
Length=937851
Score = 96.9 bits (106), Expect = 3e-15
Identities = 166/237 (70%), Gaps = 12/237 (5%)
Strand=Plus/Plus
Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274
|| || ||||| |||||||||||||| || |||||| ||||||| || ||| |||| ||
Sbjct 876364 GAAGGAGATTTAGGTCCTGTGTATGGTTTCCAATGGCGACATTTCGGCGCTAAATACATT 876423
Query 20275 GACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATT---ACAAAATGTTATTAAT 20331
|| | ||| ||||| |||||||| || |||||| | ||| ||| ||
Sbjct 876424 GATGCCGAAACAGATTATACAGGACAAGGTGTTGATCAACTGGCGGAAATTGT-----AT 876478
Query 20332 TTAA--TTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAG 20389
|| |||| | |||||| || || ||||||||| || | || ||||| | ||
Sbjct 876479 GGAAGCTTAAGAATAACCCATGGGATAGGAGAATTATTCTAAGTGCATGGAATGTGGCAG 876538
Query 20390 ATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCT 20445
|| | || ||||| || || || ||||||||| | ||| |||||||| ||| ||
Sbjct 876539 ATATTAAGTTGATGGCGTTACCACCTTGTCATATG-TTTGCGCAATTTTATGTTTCT 876594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399180969070735
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |