Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq34 129 5e-25
seq18 93.3 3e-14
>seq34
Length=376069
Score = 129 bits (142), Expect = 5e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
||| |||||||| || ||| |||||| || |||||||||||| || ||| | ||
Sbjct 166319 TAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATC 166378
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| ||||| ||||||||||| ||||| |||||||||||||| || | |||||||||||
Sbjct 166379 CTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTC 166438
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
|| || ||| || | | | ||||| | ||| ||||| | ||| || ||
Sbjct 166439 TTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGT 166498
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||||||| || ||||| || ||||| ||||||
Sbjct 166499 TTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 166532
>seq18
Length=877782
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||||| ||||| ||||| ||||||||||| || || | |||| |||
Sbjct 575140 ACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAATCCAAAAGAGTTCTGCCGTCCTCC 575199
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || ||||| ||||| ||||| |||||||| || || || | |||||||| ||| |
Sbjct 575200 AACTGCTTTCCAGCGAAGATCAATCGCTGTTGATCAGGTGGAATGCCCTCCTTATCCTGA 575259
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||| | || ||||| | || || |||||
Sbjct 575260 ATCTTAGCCTTGACATTATCAATAGTATCCGAAGATTCTACCTCTAATGTGATAGTCTTT 575319
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| ||||| ||||||||||||||
Sbjct 575320 CCAGTCAAGGTCTTAACAAAGATTTGCAT 575348
Score = 91.5 bits (100), Expect = 1e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
|| || ||| ||||||||||||||||||||| || |||| | || || |||||
Sbjct 575886 TGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGGGTGCGACCATCTTCAAGTTGC 575945
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| || ||||| ||||| |||||||| |||||||| | |||||||||||
Sbjct 575946 TTGCCTGCGAAAATCAAACGCTGTTGATCGGGAGGAATCCCCTCCTTGTC 575995
Score = 82.4 bits (90), Expect = 6e-11
Identities = 101/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | | ||| | ||||| || || || ||||||||| ||||| ||||| |
Sbjct 575578 CCACCACGAAGTCTGAGAACCAAATGGAGAGTAGACTCCTTCTGGATGTTATAGTC--TG 575635
Query 45170 AGTTGG--CGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|| || ||| | || || ||||| ||||||||||| ||||| || ||||||||||| |
Sbjct 575636 AGAGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGTTGTTGGTCGGGTG 575695
Query 45228 GCACACCCTCCTTGTC 45243
| | ||||| |||||
Sbjct 575696 GGATGCCCTCTTTGTC 575711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395072200268083
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |