Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq9 145 7e-30
>seq9
Length=1212739
Score = 145 bits (160), Expect = 7e-30
Identities = 234/333 (70%), Gaps = 5/333 (2%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | ||||||||||||||||| || || || ||||||| ||||| | ||| ||
Sbjct 164860 ATCTGGCAGATGTACAAAAAGGCAGAGGCCTCCTTCTGGACCGCAGAAGAGATTGACTTG 164919
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| |||||||| ||||||| || | ||||| || ||| | | || ||
Sbjct 164920 TCAAAGGATCTTCACGATTGGAATAACAGGCTCAATGACGACGAGCGTTACTTCATCTCT 164979
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || ||||| ||||||||||| ||||| |||||||| || ||| |||
Sbjct 164980 CACGTTCTCGCATTCTTCGCAGCATCCGATGGAATTGTCAACGAGAACTTAGTCTCGAGA 165039
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| | ||||| ||| | | ||||| ||| ||| ||||| || ||||| ||
Sbjct 165040 TTCAGTAATGAAGTTCAAATTGCAGAGGCACGATTCTTCTACGGTTTCCAAGTCATGATG 165099
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-CAACGA 57865
|| ||| | || || |||| || || || |||||||| || ||| | ||||| ||| |
Sbjct 165100 GAGAACATCCACTCCGAAACATACTCTCTTCTCATCGACACATACATCAAGGAGCAAGCA 165159
Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAAC 57898
| | | || || || |||||||| || || ||
Sbjct 165160 CAAAAGACATA-CCTTTTCAACGCTATTGACAC 165191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445762928594160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |