Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3 109 1e-18 seq15 87.8 4e-12 >seq3 Length=2126074 Score = 109 bits (120), Expect = 1e-18 Identities = 186/267 (70%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || || || | || || ||| |||| ||||| || || ||| | |||| Sbjct 692034 TGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTA 692093 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || || ||||| ||||| ||||| |||| | | | | ||||||||||| |||||||| Sbjct 692094 TCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAGCACGACGAAAGTTGT 692153 Query 94894 GGT-GTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 | | ||| || || | ||| || || ||||||||||| ||||| || | | || Sbjct 692154 GCTTGTGGA-GTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGTAAAGTACTTGTTTGA 692212 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012 ||| | | |||||||| || || || ||| || |||||||| || || || || Sbjct 692213 CATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCGTGAATACCCACGGCAAC 692272 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTC 95039 |||||| ||||| | ||||| ||||| Sbjct 692273 ACGCATGATCATTTGTTGAGGACGCTC 692299 >seq15 Length=937851 Score = 87.8 bits (96), Expect = 4e-12 Identities = 165/239 (69%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 35385 ATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTG 35444 || |||| || |||||||| || || || || || ||||||||||| ||||| || ||| Sbjct 876356 ATCGAGCCGAAGGAGATTTAGGTCCTGTGTATGGTTTCCAATGGCGACATTTCGGCGCTA 876415 Query 35445 AATA---TGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATA 35501 |||| |||| || | |||||||| ||| | ||| |||||||| |||| | | Sbjct 876416 AATACATTGATGCC---GAAACAGATTATACAGGACAAGGTGTTGATCAACTGGCGGAAA 876472 Query 35502 TACTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAAT 35560 | || || || | |||| || ||| ||||| || || ||| | | ||||||||| Sbjct 876473 TTGTATGGAAGCTTA-AGAATAACCCATGGGATAGGAGAATTATTCTAAGTGCATGGAAT 876531 Query 35561 CCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619 ||| || | | ||||| | || || || || ||| ||| ||||||||||| Sbjct 876532 GTGGCAGATATTAAGTTGATGGCGTTACCACCTTGTCATATGTTTGCGCAATTTTATGT 876590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989576100954965