Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 1e-18
seq15 87.8 4e-12
>seq3
Length=2126074
Score = 109 bits (120), Expect = 1e-18
Identities = 186/267 (70%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| || || || | || || ||| |||| ||||| || || ||| | ||||
Sbjct 692034 TGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTA 692093
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893
|| || ||||| ||||| ||||| |||| | | | | ||||||||||| ||||||||
Sbjct 692094 TCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAGCACGACGAAAGTTGT 692153
Query 94894 GGT-GTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952
| | ||| || || | ||| || || ||||||||||| ||||| || | | ||
Sbjct 692154 GCTTGTGGA-GTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGTAAAGTACTTGTTTGA 692212
Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012
||| | | |||||||| || || || ||| || |||||||| || || || ||
Sbjct 692213 CATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCGTGAATACCCACGGCAAC 692272
Query 95013 ACGCATAATCATGTCCTGAGGGCGCTC 95039
|||||| ||||| | ||||| |||||
Sbjct 692273 ACGCATGATCATTTGTTGAGGACGCTC 692299
>seq15
Length=937851
Score = 87.8 bits (96), Expect = 4e-12
Identities = 165/239 (69%), Gaps = 8/239 (3%)
Strand=Plus/Plus
Query 35385 ATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTG 35444
|| |||| || |||||||| || || || || || ||||||||||| ||||| || |||
Sbjct 876356 ATCGAGCCGAAGGAGATTTAGGTCCTGTGTATGGTTTCCAATGGCGACATTTCGGCGCTA 876415
Query 35445 AATA---TGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATA 35501
|||| |||| || | |||||||| ||| | ||| |||||||| |||| | |
Sbjct 876416 AATACATTGATGCC---GAAACAGATTATACAGGACAAGGTGTTGATCAACTGGCGGAAA 876472
Query 35502 TACTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAAT 35560
| || || || | |||| || ||| ||||| || || ||| | | |||||||||
Sbjct 876473 TTGTATGGAAGCTTA-AGAATAACCCATGGGATAGGAGAATTATTCTAAGTGCATGGAAT 876531
Query 35561 CCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
||| || | | ||||| | || || || || ||| ||| |||||||||||
Sbjct 876532 GTGGCAGATATTAAGTTGATGGCGTTACCACCTTGTCATATGTTTGCGCAATTTTATGT 876590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989576100954965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |