Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq3 282 6e-71
seq9 123 3e-23
>seq3
Length=2126074
Score = 282 bits (312), Expect = 6e-71
Identities = 1319/2067 (64%), Gaps = 53/2067 (3%)
Strand=Plus/Plus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
||||||||||| || || || || | | ||||||| |||||||||||| || || | |
Sbjct 690537 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 690596
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958
|| | ||||||| ||| |||||| || | ||| | ||||| ||
Sbjct 690597 CCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 690656
Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018
|| || ||||| |||||| ||||||||| || || || | || |||||||||| |
Sbjct 690657 TGAATGTTCATTGATTGAGATTGATCGATAAATGCACCGCGATCAGCAGCCATTTGAACA 690716
Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078
|| || ||| | ||||||||||| ||| || |||| ||| || || |||||| |
Sbjct 690717 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 690776
Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135
|| | | || ||||| ||||||||||| || || || | ||||| || | ||| |
Sbjct 690777 TTGGGGATGTTTTGAATAGATCCACCATCAGCAATGATACGGTTCTTCATGTTGTCAGAC 690836
Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195
|| | | || | || | ||||| || ||||| ||||| ||||||||
Sbjct 690837 CAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATGGGTTAACAACTTGGAATTCTCCG 690896
Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255
| || || | || | ||| || || || || ||||| | | | || || ||
Sbjct 690897 GCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACATTCGTTGAAACCG 690956
Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 65315
| ||||| | ||| ||||| ||||||||||| || | | | || | || |||
Sbjct 690957 AGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGAGTTGCGAATTCCG 691016
Query 65316 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 65375
| | |||| | || | || ||||||| ||| | ||| || || ||
Sbjct 691017 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGAAGGAGTGACGCCC 691076
Query 65376 NNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACATATGTATCGTA 65431
||| || ||| || ||||| | | ||| || || |||||
Sbjct 691077 CACATGTCATATTGGAGTTCACCCTTGGAGACTGGAG----AGCCTTGGTAAGTTTCGTA 691132
Query 65432 TGGTCC---TTCCTTCTC-AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 65487
|| || |||||| | | || | ||| | || || ||| ||| || ||||
Sbjct 691133 CGGGCCAAGTTCCTTTGCGATCTCG---ACAGATGAGGTC-AAGGCAGCGTGGTAGATGG 691188
Query 65488 TTTCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTA-TCAAATGGATAATTTAA 65545
| || || |||| | || || | |||| ||||| ||| | || |||||| | ||
Sbjct 691189 TCTCAAAAATCTGGATGTTGAGGTGCTTG-GCTTCT-GGCGAGTCGAATGGAAGACG-AA 691245
Query 65546 GAG--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603
||| || ||| || || || | ||||||||||||| | ||||||||| ||| | |
Sbjct 691246 GAGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAA 691304
Query 65604 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663
|| || |||||| | | |||||||| || ||||| || || || || | |||
Sbjct 691305 TTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTT 691364
Query 65664 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCTCATCTATT 65720
|| || | |||| ||| || || | || || | |||||| | || ||||| ||
Sbjct 691365 CTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATG 691424
Query 65721 ---AC-AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 65776
|| ||| || | | |||| || |||| ||||| || ||||||| | |
Sbjct 691425 TTGACGAAAGTTGGTAGA-GCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGC 691483
Query 65777 CGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTG 65836
| || | | ||||| ||||| | || | || || || | || | |||
Sbjct 691484 AGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTG 691543
Query 65837 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTG 65896
|| ||||| ||||| || ||||| || ||||| ||||| ||| | || ||||| | ||
Sbjct 691544 GTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGTTTG 691603
Query 65897 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTC 65956
|| || | ||| | | ||||| | ||||||| || || ||| | |||| |
Sbjct 691604 AGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTTCC 691660
Query 65957 TC---TTTCGTATAGTGTA-TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATC 66012
| |||| || | | | || | || ||||| || || |||||| |||| |
Sbjct 691661 TGCCTTTTCATA-ACTCTCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAAC 691719
Query 66013 CAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 66072
|||| ||||||| || ||||| | | ||| ||||| | | | || || ||||| |
Sbjct 691720 CAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCTTCATGA 691779
Query 66073 AGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
| | |||||||||||| | || ||| || | ||| | | | | ||| || || ||
Sbjct 691780 ACAAATCAGGAATCCACAAGGC-ATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACCG 691838
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
||||| ||||| || ||| | | || ||| |||||| || || | ||| |
Sbjct 691839 TGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACA 691898
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | | || || |||||||| || |||||||| | ||||| || ||||| || ||
Sbjct 691899 GCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTTGAAA 691958
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|||| | ||| |||| |||||||||||| | ||||| || |||| ||| || |||
Sbjct 691959 ACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGCACCA 692018
Query 66312 CTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 66371
| ||||| || | ||| ||||| || || || || | || ||||| | ||
Sbjct 692019 GTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCA 692078
Query 66372 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 66431
|| || || ||||| ||||| || || |||||||| || |||||| | || ||
Sbjct 692079 CAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAG 692138
Query 66432 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 66491
|| || | ||| | ||| |||||| ||| | || || ||||| || |||
Sbjct 692139 CACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGTA 692198
Query 66492 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATG 66550
|| | || | || | | ||||| || || ||||| || ||||| || | ||
Sbjct 692199 AAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCG-TG 692257
Query 66551 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 66610
||| || || || |||||||| | ||| || ||||| | || | | || | |
Sbjct 692258 AATACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACCATCAAG 692317
Query 66611 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 66668
|| | || ||| || | || || || || || || | ||| ||||| ||
Sbjct 692318 ACGTAAAAGATATGATCGCTCAAGGGTCTTGAACCCGAAGTATTGGTAGTTGAAA--TCC 692375
Query 66669 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTA 66728
|| || || | |||| | |||||||||| |||| || | | | || || | ||
Sbjct 692376 CGGTCATAGACAATAGCAGAGTTGAGTTCTTCCTCATGTCTCATGACGCATTCGAAAGT- 692434
Query 66729 ATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATC 66787
| |||| ||| || |||||| ||| |||||||| || || ||| | | |||||||
Sbjct 692435 TTCCTTGCTAATCATAGGAGAAGCTTTGCCATTTTTTGGGTTTGTATATTGGTATAAATC 692494
Query 66788 CTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCT 66847
|| || | || | || || |||| |||||| || |||||||| || || |
Sbjct 692495 GCGGATAACGTGGGAGAACTGCTTCTTGGTTTGTTTGTGGAGGTTTGATACTGCAATACG 692554
Query 66848 AGCGGCTATAATGGCATAATCCGGATG 66874
||| |||| |||||||||||| |||||
Sbjct 692555 AGCAGCTAGAATGGCATAATCGGGATG 692581
>seq9
Length=1212739
Score = 123 bits (136), Expect = 3e-23
Identities = 289/436 (66%), Gaps = 0/436 (0%)
Strand=Plus/Minus
Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926
|||||||| || || || | || ||||| || || || || || | || || || ||
Sbjct 165760 TTTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 165701
Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986
|||||||| |||||||| ||| | || || | ||| | ||||| || | |
Sbjct 165700 TCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCCAAAGCAACCAGC 165641
Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046
| | ||| ||||| || || || ||| ||||| | | | ||||| |||| |||
Sbjct 165640 AGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAAAGA 165581
Query 36047 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 36106
||||||||| | || | ||||||||||| || || || || || || | |
Sbjct 165580 GAGCAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACA 165521
Query 36107 GATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 36166
| || | || || || | | | | ||| || | | |||||||||
Sbjct 165520 TCTTGGACGGCTTGTTTGGATGGGCGGTGCTTGAGATGAGAGAATAGGAGGCATGCGAAA 165461
Query 36167 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 36226
||| ||| ||||| || || | || | ||||||||| || |||||||| | |||
Sbjct 165460 TCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATG 165401
Query 36227 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 36286
|| ||||||||||| ||||| || || || ||||| |||||||| ||||| || |||||
Sbjct 165400 AGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTTCA 165341
Query 36287 ACTGCCGCAAAGGCAA 36302
|| || || || ||||
Sbjct 165340 ACAGCGGCGAATGCAA 165325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658167674479320
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