Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3 338 9e-88
seq9 156 6e-33
>seq3
Length=2126074
Score = 338 bits (374), Expect = 9e-88
Identities = 1338/2070 (65%), Gaps = 59/2070 (3%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
||||||||||| || || || || | | ||||||| |||||||||||| || || | |
Sbjct 690537 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 690596
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
|| | ||||||| || |||||| || | ||| | ||||| ||
Sbjct 690597 CCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 690656
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
|| || ||||| |||||| ||||||||| || || || | || |||||||||| |
Sbjct 690657 TGAATGTTCATTGATTGAGATTGATCGATAAATGCACCGCGATCAGCAGCCATTTGAACA 690716
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957
|| || ||| | ||||||||||| ||| || |||| ||| || || |||||| |
Sbjct 690717 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 690776
Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014
|| | | || ||||| ||||||||||| || || || | ||||| || | ||| |
Sbjct 690777 TTGGGGATGTTTTGAATAGATCCACCATCAGCAATGATACGGTTCTTCATGTTGTCAGAC 690836
Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074
|| | | || | || | ||||| || ||||| ||||| ||||||||
Sbjct 690837 CAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATGGGTTAACAACTTGGAATTCTCCG 690896
Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134
| || || | || | ||| || || || |||||||| | |||| || ||
Sbjct 690897 GCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACATTCGTTGAAACCG 690956
Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194
| ||||| | ||| || || ||||||||||| || | | | || | || |||
Sbjct 690957 AGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGAGTTGCGAATTCCG 691016
Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254
| | |||| | || | ||| ||||||||||| | |||||| || || |
Sbjct 691017 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGAAGGAGTGACGCCC 691076
Query 79255 CAAAGATCATATTGTAGAATACCGTT----ACTAGCGTATGATCCTGTGTATGTTTCATA 79310
|| | |||||||| || ||| || ||| | | | ||| ||| ||||| ||
Sbjct 691077 CACATGTCATATTGGAGTTCACCCTTGGAGACTGGAG----AGCCTTGGTAAGTTTCGTA 691132
Query 79311 AGGTCC---TTCCTTTTCGGCTAATTC-ACAACTCGCCTCTAATGCTCCGTAATAAATGG 79366
|| || ||||||| || | || ||| | || || || ||| || ||||
Sbjct 691133 CGGGCCAAGTTCCTTTGCG---ATCTCGACAGATGAGGTC-AAGGCAGCGTGGTAGATGG 691188
Query 79367 TTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTA-TCAAATGGATAATTTAA 79424
| || ||||||| | ||||| | |||| |||||| ||| | || |||||| | ||
Sbjct 691189 TCTCAAAAATCTGGATGTTGAGGTGCTTG-GCTTCT-GGCGAGTCGAATGGAAGACG-AA 691245
Query 79425 GAG--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482
||| || ||| || || || | ||||||||||||| | ||||||||| ||| | |
Sbjct 691246 GAGCCAAGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAA 691304
Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542
|| || |||||| | | |||||||| || ||||| || || || || | ||
Sbjct 691305 TTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTT 691364
Query 79543 CTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TA 79597
|| || | |||| ||| || || | || || | |||||| | ||| || |
Sbjct 691365 CTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATG 691424
Query 79598 TT-AC-AAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 79655
|| || ||| || | | || | || |||| ||||| || ||||||| | |
Sbjct 691425 TTGACGAAAGTTGGTAGA-GCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGC 691483
Query 79656 CGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTG 79715
| || | | || || ||||| | ||| | ||| || || | || | |||
Sbjct 691484 AGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTG 691543
Query 79716 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTG 79775
|| ||||| ||||| || ||||| || ||||| ||||| ||| | || ||||| | ||
Sbjct 691544 GTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGTTTG 691603
Query 79776 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTC 79835
|| || | ||| | | ||||| | ||||||| || || |||| | |||| |
Sbjct 691604 AGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGAT---AGTCTTGCGACCCTTTCC 691660
Query 79836 TC---TTTCGTAT-TGT-GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAAT 79890
| |||| || | | ||| | | || ||||| || || ||||||| | ||
Sbjct 691661 TGCCTTTTCATAACTCTCGTAGAGGGCC--TCAAACTCCTCGCCATAAACATCTGCCAAA 691718
Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACTCGTTTCA 79948
||||| ||||| | || ||||| | | ||| ||||||| || ||| || || ||||
Sbjct 691719 CCAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCAT--TCTTTTCGACACGCTTCA 691776
Query 79949 TAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTT 80007
| || | |||||||||||| | || ||| || ||||| | | | | || || ||
Sbjct 691777 TGAACAAATCAGGAATCCACAAGGC-ATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTA 691835
Query 80008 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 80067
|| ||||| ||||| || ||| | | || ||| | |||||| || || | |||
Sbjct 691836 CCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAA 691895
Query 80068 ATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 80127
| || | | | ||||| |||||||| || |||||||| | ||||| || ||||| ||
Sbjct 691896 ACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTTG 691955
Query 80128 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTT 80187
|||||| | ||| |||| |||||||||||| | ||||| || |||| ||| ||
Sbjct 691956 AAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGCA 692015
Query 80188 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 80247
||| | ||||| || | ||| ||||| || || || || | || ||||| |
Sbjct 692016 CCAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATG 692075
Query 80248 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGA 80307
|| || || || ||||| ||||| || || || ||||| || |||||| | ||
Sbjct 692076 GCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGG 692135
Query 80308 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 80367
|| || || | ||| | ||| |||||| ||| | || || ||||| ||
Sbjct 692136 AAGCACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATGT 692195
Query 80368 GTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTG 80426
||||| | || | |||| | ||||| || || ||||| ||| ||||| || |
Sbjct 692196 GTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCG 692255
Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATT 80486
||||| || || || |||||||| | ||| || ||||| | || | | || ||
Sbjct 692256 -TGAATACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACCATC 692314
Query 80487 TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAG 80544
| || | || ||| || | || || || || || || | ||| |||||
Sbjct 692315 AAGACGTAAAAGATATGATCGCTCAAGGGTCTTGAACCCGAAGTATTGGTAGTTGAAA-- 692372
Query 80545 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 80604
|| || || || | |||| | |||||||||| |||| || | | | || || |
Sbjct 692373 TCCCGGTCATAGACAATAGCAGAGTTGAGTTCTTCCTCATGTCTCATGACGCATTCGAAA 692432
Query 80605 GTGATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 80663
|| | |||| ||| || |||||| ||| |||||||| || || ||| | | ||||
Sbjct 692433 GT-TTCCTTGCTAATCATAGGAGAAGCTTTGCCATTTTTTGGGTTTGTATATTGGTATAA 692491
Query 80664 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 80723
||| || || | || | || || |||| ||||| || |||||||| || ||
Sbjct 692492 ATCGCGGATAACGTGGGAGAACTGCTTCTTGGTTTGTTTGTGGAGGTTTGATACTGCAAT 692551
Query 80724 TCTGGCGGCTAAAATGGCATAATCTGGATG 80753
| || |||| |||||||||||| |||||
Sbjct 692552 ACGAGCAGCTAGAATGGCATAATCGGGATG 692581
>seq9
Length=1212739
Score = 156 bits (172), Expect = 6e-33
Identities = 342/512 (67%), Gaps = 3/512 (1%)
Strand=Plus/Minus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| || || || | || ||||| || || || || || |||| || || ||
Sbjct 165760 TTTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 165701
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||| || || || |||| | || || | ||| | ||||| || | |
Sbjct 165700 TCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCCAAAGCAACCAGC 165641
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848
| | ||| ||||| || || || ||| ||||| | | | ||||| |||| |||
Sbjct 165640 AGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAAAGA 165581
Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908
||||||||| | || | ||||||||||| || || || || || || | |
Sbjct 165580 GAGCAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACA 165521
Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968
| |||| || || || | ||| | ||| || | | |||||||||
Sbjct 165520 TCTTGGACGGCTTGTTTGGATGGGCGGTGCTTGAGATGAGAGAATAGGAGGCATGCGAAA 165461
Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028
||| ||| ||||| || || | || ||||||||||| || |||||||| | |||
Sbjct 165460 TCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATG 165401
Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088
|| ||||||||||| ||||| || || || ||||| || ||||| |||||||| |||||
Sbjct 165400 AGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTTCA 165341
Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGT---ATCCACTTT 50145
|| ||||| || ||||| || | | || | | | ||| | || | ||||| ||
Sbjct 165340 ACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCAATCCATTTG 165281
Query 50146 TGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177
||||||||||||||| || || | |||||
Sbjct 165280 ACAGCCCAATCGGCCTTTTTCTTAATGCAAGG 165249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718263206481720
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