Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq18 82.4 8e-11
>seq18
Length=877782
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| | || ||||| | || ||||||||||| |||||||| |||
Sbjct 575350 CCACCACGAAGACGAAGGACCAAATGTAAAGTTGATTCTTTTTGGATGTTGTAGTCGGAA 575409
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | || || ||||| ||||||||| |||| |||||||| || || || ||
Sbjct 575410 AGAGTTCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCAGGTGGG 575469
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || |||||||| ||| || || | | || | || |||| | || ||
Sbjct 575470 ATACCCTCTTTGTCTTGAATCTTAGCCTTCACATTGTCGATGGTATCCGACGACTCAACC 575529
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | ||||| ||||| | || || ||||| || ||||||
Sbjct 575530 TCTAAAGTGATTGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCATA 575577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507010451625360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |