Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq9 129 9e-25 seq3 91.5 2e-13 >seq9 Length=1212739 Score = 129 bits (142), Expect = 9e-25 Identities = 203/288 (70%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||||||||| |||||||||| ||||| | |||||| | || || Sbjct 164860 ATCTGGCAGATGTACAAAAAGGCAGAGGCCTCCTTCTGGACCGCAGAAGAGATTGACTTG 164919 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||||||| | | | | | ||| ||||| | || || || Sbjct 164920 TCAAAGGATCTTCACGATTGGAATAACAGGCTCAATGACGACGAGCGTTACTTCATCTCT 164979 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| || | || ||||| || | ||||||||||| |||||||| || | | | || Sbjct 164980 CACGTTCTCGCATTCTTCGCAGCATCCGATGGAATTGTCAACGAGAACTTAGTCTCGAGA 165039 Query 125199 TTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| | | | |||| | ||| |||||| | ||| ||||| |||||| ||||||| Sbjct 165040 TTCAGTAATGAAGTTCA-AATTGCAGAGGCACGATTCTTCTACGGTTTCCAAGTCATGAT 165098 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||||| | ||||| |||| |||||| || || |||| ||||| Sbjct 165099 GGAGAACATCCACTCCGAAACATACTCTCTTCTCATCGACACATACAT 165146 >seq3 Length=2126074 Score = 91.5 bits (100), Expect = 2e-13 Identities = 176/260 (68%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921 || |||| ||| ||||| || || ||||| || || ||| | || || ||| | || | Sbjct 691944 CAAGATATGTTGATCAGGGTGGTAACAAACGCCCGGGTGCTTTTGCTGTTTACCTTGAGC 691885 Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981 | ||||| || || ||||| || ||| | || | ||||| ||| || ||||| | Sbjct 691884 CATGGCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAGAACCACGGTAAGGAAGAAG 691825 Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCA 97041 || || | || | || ||||| | ||| | || ||||||||||||||||| ||| Sbjct 691824 TTCGCGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTCG 691765 Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101 | | ||| | |||| || ||||||||| | | || ||| || | ||| | Sbjct 691764 AAAAGAATGGAGAATGGACTCTTATGTGCCCCAATGAATGCCCTGGTTTGGCAGATGTTT 691705 Query 97102 GGGGCGAAGAGTTTGAGGCC 97121 ||||| |||||||||||| Sbjct 691704 ATGGCGAGGAGTTTGAGGCC 691685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741053429001480