Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq9 129 9e-25
seq3 91.5 2e-13
>seq9
Length=1212739
Score = 129 bits (142), Expect = 9e-25
Identities = 203/288 (70%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||||||||| |||||||||| ||||| | |||||| | || ||
Sbjct 164860 ATCTGGCAGATGTACAAAAAGGCAGAGGCCTCCTTCTGGACCGCAGAAGAGATTGACTTG 164919
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||||||| | | | | | ||| ||||| | || || ||
Sbjct 164920 TCAAAGGATCTTCACGATTGGAATAACAGGCTCAATGACGACGAGCGTTACTTCATCTCT 164979
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || | || ||||| || | ||||||||||| |||||||| || | | | ||
Sbjct 164980 CACGTTCTCGCATTCTTCGCAGCATCCGATGGAATTGTCAACGAGAACTTAGTCTCGAGA 165039
Query 125199 TTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257
||| | | | |||| | ||| |||||| | ||| ||||| |||||| |||||||
Sbjct 165040 TTCAGTAATGAAGTTCA-AATTGCAGAGGCACGATTCTTCTACGGTTTCCAAGTCATGAT 165098
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
|||||| | ||||| |||| |||||| || || |||| |||||
Sbjct 165099 GGAGAACATCCACTCCGAAACATACTCTCTTCTCATCGACACATACAT 165146
>seq3
Length=2126074
Score = 91.5 bits (100), Expect = 2e-13
Identities = 176/260 (68%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921
|| |||| ||| ||||| || || ||||| || || ||| | || || ||| | || |
Sbjct 691944 CAAGATATGTTGATCAGGGTGGTAACAAACGCCCGGGTGCTTTTGCTGTTTACCTTGAGC 691885
Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981
| ||||| || || ||||| || ||| | || | ||||| ||| || ||||| |
Sbjct 691884 CATGGCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAGAACCACGGTAAGGAAGAAG 691825
Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCA 97041
|| || | || | || ||||| | ||| | || ||||||||||||||||| |||
Sbjct 691824 TTCGCGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTCG 691765
Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101
| | ||| | |||| || ||||||||| | | || ||| || | ||| |
Sbjct 691764 AAAAGAATGGAGAATGGACTCTTATGTGCCCCAATGAATGCCCTGGTTTGGCAGATGTTT 691705
Query 97102 GGGGCGAAGAGTTTGAGGCC 97121
||||| ||||||||||||
Sbjct 691704 ATGGCGAGGAGTTTGAGGCC 691685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741053429001480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |