Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq18 100 2e-16 >seq18 Length=877782 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || | |||| || ||||| ||||||||||| ||| |||| |||| || Sbjct 575140 ACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAATCCAAAAGAGTTCTGCCGTCCTCC 575199 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 || || || |||||| | ||||| || ||||| || |||||| || || || || | Sbjct 575200 AACTGCTTTCCAGCGAAGATCAATCGCTGTTGATCAGGTGGAATGCCCTCCTTATCCTGA 575259 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| ||| | || || ||||| | |||||| ||||| || || || || Sbjct 575260 ATCTTAGCCTTGACATTATCAATAGTATCCGAAGATTCTACCTCTAATGTGATAGTCTTT 575319 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| || || ||||| ||||||||| Sbjct 575320 CCAGTCAAGGTCTTAACAAAGATTTGCATA 575349 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| | || || |||||||| |||||||| ||| ||| ||| | || || Sbjct 575368 ACCAAATGTAAAGTTGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCA 575427 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||| || ||||| | || | |||||||||||| ||| || || |||||||| | Sbjct 575428 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCCTCTTTGTCTTGA 575487 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| ||| | || |||||||| || || ||||| || || || || Sbjct 575488 ATCTTAGCCTTCACATTGTCGATGGTATCCGACGACTCAACCTCTAAAGTGATTGTCTTT 575547 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || ||||| || || || || |||||| Sbjct 575548 CCGGTGAGAGTCTTGACGAAGATCTGCATA 575577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362176450041243