Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq18 140 7e-28 >seq18 Length=877782 Score = 140 bits (154), Expect = 7e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 ||| || ||||| || || || | |||||||| ||||| || | || |||||||| || Sbjct 575157 TTCCTTTTGAATGTTGTAATCCAAAAGAGTTCTGCCGTCCTCCAACTGCTTTCCAGCGAA 575216 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 || | | |||||||||||| || || || || |||||||||||||| || || ||||| Sbjct 575217 GATCAATCGCTGTTGATCAGGTGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATT 575276 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | ||||| || ||||||||||| ||| |||||||| ||||| | || || || Sbjct 575277 ATCAATAGTATCCGAAGATTCTACCTCTAATGTGATAGTCTTTCCAGTCAAGGTCTTAAC 575336 Query 104548 AAATATCTGCAT 104559 ||| || ||||| Sbjct 575337 AAAGATTTGCAT 575348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151389209322084