Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq14 111 2e-20
seq53 100 4e-17
>seq14
Length=943420
Score = 111 bits (122), Expect = 2e-20
Identities = 123/164 (75%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||||||||||| |||||| || || || | |||||
Sbjct 693402 TGATCTACGAAGAGACCCGTGGTGTTTTGAAGACCTTCCTTGAGGGTGTCATTCGTGATG 693461
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || |||||||| ||||| || || ||||||||||| ||| | ||| |||| || |
Sbjct 693462 CCGTCACATATACCGAACACGCCAAGCGCAAGACTGTCACTTCCCTCGATGTCGTTTACG 693521
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| ||||| | ||||| |||| | |||||||| || |||||
Sbjct 693522 CTTTGAAGAGACAAGGTCGTACTCTCTATGGTTTCGGTGGTTAA 693565
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||||||||| |||| | | |||| || |||||||| |||||||||||||||||
Sbjct 693197 GCTAAGCGTCATCGTAAGAT-TTTGAGAGACAATATCCAAGGTATCACCAAGCCAGCTAT 693255
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| | ||||| |||||||||||||| ||||||||| | ||||
Sbjct 693256 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 693296
>seq53
Length=158951
Score = 100 bits (110), Expect = 4e-17
Identities = 83/99 (84%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||||||| |||| | | |||| ||||| ||||| || || |||||||||||
Sbjct 149481 GCTAAGCGTCATCGCAAGAT-TTTGAGAGACAACATTCAAGGCATAACTAAGCCAGCTAT 149539
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
| | ||||| || ||||||||||| ||||||||| ||||
Sbjct 149540 CAGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTC 149578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074630386739
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |