Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq14 111 2e-20 seq53 100 4e-17 >seq14 Length=943420 Score = 111 bits (122), Expect = 2e-20 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| |||| ||||||||||| |||||| || || || | ||||| Sbjct 693402 TGATCTACGAAGAGACCCGTGGTGTTTTGAAGACCTTCCTTGAGGGTGTCATTCGTGATG 693461 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || |||||||| ||||| || || ||||||||||| ||| | ||| |||| || | Sbjct 693462 CCGTCACATATACCGAACACGCCAAGCGCAAGACTGTCACTTCCCTCGATGTCGTTTACG 693521 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | ||||| | ||||| |||| | |||||||| || ||||| Sbjct 693522 CTTTGAAGAGACAAGGTCGTACTCTCTATGGTTTCGGTGGTTAA 693565 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||||| |||| | | |||| || |||||||| ||||||||||||||||| Sbjct 693197 GCTAAGCGTCATCGTAAGAT-TTTGAGAGACAATATCCAAGGTATCACCAAGCCAGCTAT 693255 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | | ||||| |||||||||||||| ||||||||| | |||| Sbjct 693256 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 693296 >seq53 Length=158951 Score = 100 bits (110), Expect = 4e-17 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||| |||| | | |||| ||||| ||||| || || ||||||||||| Sbjct 149481 GCTAAGCGTCATCGCAAGAT-TTTGAGAGACAACATTCAAGGCATAACTAAGCCAGCTAT 149539 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 | | ||||| || ||||||||||| ||||||||| |||| Sbjct 149540 CAGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTC 149578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074630386739