Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq18 109 5e-19
seq3 107 2e-18
>seq18
Length=877782
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852
|| ||||| | |||||| |||| | ||||| || || ||||| | ||||||
Sbjct 575780 ACCGGAAAGACCATCACCCTCGAGGTTGAATCTTCTGATACTATCGATAACGTCAAAGCC 575721
Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912
|||||| |||||||| || || || ||||| |||||| | | |||| || ||| ||
Sbjct 575720 AAGATTCAAGACAAAGAGGGCATCCCACCCGACCAACAACGTTTGATTTTCGCCGGAAAG 575661
Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972
||||| || |||| | | | | || ||||||||||| || || || |||||| |||||
Sbjct 575660 CAACTTGAGGATGGTCGTACCCTCTCAGACTATAACATCCAGAAGGAGTCTACTCTCCAT 575601
Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995
|||| || |||||| | || ||
Sbjct 575600 TTGGTTCTCAGACTTCGTGGTGG 575578
Score = 100 bits (110), Expect = 3e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852
|||||||| | |||||| | || | || || | |||||| || || | ||||||
Sbjct 576064 ACTGGAAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACTATTGACAATGTCAAAGCC 576005
Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912
||||| ||||| || ||||| |||||||||||||| | | |||| || |||||
Sbjct 576004 AAGATCCAAGACAAGGAGGGGATTCCTCCCGATCAACAGCGTTTGATTTTCGCAGGCAAG 575945
Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972
||||| ||||||| | | | | || ||||| |||||||| || || || || | |||
Sbjct 575944 CAACTTGAAGATGGTCGCACCCTCTCAGACTACAACATTCAGAAGGAGTCCACACTTCAT 575885
Query 26973 CTGGTCCT 26980
|| |||||
Sbjct 575884 CTCGTCCT 575877
>seq3
Length=2126074
Score = 107 bits (118), Expect = 2e-18
Identities = 419/645 (65%), Gaps = 29/645 (4%)
Strand=Plus/Plus
Query 148251 TCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACAC 148310
|| ||| | ||||| ||| |||| || || | |||||| ||| ||||| || ||
Sbjct 691668 TCATAACTCTCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAACCAGGGCAT 691727
Query 148311 TCGTCGGGGCACATCAATGACCATTTCCCTCCTGTCTTT---ACCCTCTTCATAAACAGA 148367
|| | ||||||||| | | ||||| |||| ||||| || | |||||| |||| |
Sbjct 691728 TCATTGGGGCACATAAGAGTCCATT---CTCCATTCTTTTCGACACGCTTCATGAACAAA 691784
Query 148368 TCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGGCACCCA---TA 148424
||||| |||||| |||| | | |||||||| || | || || ||| |
Sbjct 691785 TCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACCGTGGTTC 691844
Query 148425 TTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGTATACGGTC 148484
||||| |||||| | ||| ||||| || || ||||| ||||| | ||| || |
Sbjct 691845 TTGCG---TAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCA 691901
Query 148485 ATGGCGCCTTTCCTTTT---ACCTCCTTGATCGACATGGCGTAGCA-TGCTATTAAAAAC 148540
| || || | ||| ||| || ||||| |||| | | ||| || | || |||||
Sbjct 691902 AAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTT-GCAGTGTTGTTGAAAAC 691960
Query 148541 ACGCAATGCA-GGTCCCAATCCCGCCGCAGTT-CCGTTTGTGGATTCAATTTTACTATTG 148598
|| | ||| || |||| || | | || || || || | || | |
Sbjct 691961 TCGAA--GCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGCACCA 692018
Query 148599 GTGGCGCGAATT---TGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATG 148655
|| || || ||| ||| || || || || || || || | | || || ||||||
Sbjct 692019 GTAGCACGGATTCTGTGAATG---TTGAGACCAATACCACCGGCATTCTTTGAGATCATG 692075
Query 148656 GCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGG 148715
|||||| || | || | ||||| || | |||||| ||||||| |||| | |||
Sbjct 692076 GCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGG 692135
Query 148716 TAGCACGATGACATTTGAGGCATTTTCA-TGCCAGACGAAAATAGAGTTGGACTAGCGTG 148774
||||||| || | ||| || | | | | || | ||||| || ||||| ||| ||
Sbjct 692136 AAGCACGACGAAAGTTG-TGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATG 692194
Query 148775 AGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTTTCGATGTCATCACC 148834
|| || ||| |||||| | || | ||||||||| |||||||| ||||||||
Sbjct 692195 TGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACC 692254
Query 148835 ATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTC 148879
||||| | || |||||||| | ||| |||||||| | |||
Sbjct 692255 GTGAATACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTC 692299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478658672416560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |