Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3 316 5e-81 seq6 84.2 6e-11 >seq3 Length=2126074 Score = 316 bits (350), Expect = 5e-81 Identities = 1158/1786 (65%), Gaps = 34/1786 (2%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | ||||| | ||| ||| || || | ||| | ||||| | ||| || Sbjct 692356 TTCGGGTTCAAGACCCTTGAGCGATCATATCTTTTACGTCTTGATGGTAAAGTTGCGGAG 692297 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || || || ||| | ||||||||||| | ||||| || | ||| | || Sbjct 692296 CGTCCTCAACAAATGATCATGCGTGTTGCCGTGGGTATTCACGGTGATGATATCGAAAGT 692237 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACAA 363568 || || |||||||| || ||| | || | ||| || || || || | ||||| Sbjct 692236 GCTATCGAAACATACAA-CTTG-ATGTCAAACAAGTACTTTACACATGCTTCCCCAACGC 692179 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | ||| || |||| | |||| | || || ||||| || | | ||||| | Sbjct 692178 TCTTTTCTGCGGGTACTCCACAAGCACAACTTTCGTCGTGCTTCCTCATCGACATGAAAG 692119 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | ||| || || ||||||| || || | |||| |||||| | || || ||||||| Sbjct 692118 AGGATAGTATTGATGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGAATG 692059 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATTCGCGG 363746 | || || |||||| | || |||| | ||||| || | || ||||| ||| Sbjct 692058 CCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGCA--TACATCGCCGG 692001 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || ||| | || ||||| | |||||||||||||| || || |||| ||||| || Sbjct 692000 TACTAATGGAAATTCCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCAAG 691941 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 || || || |||||||| || ||| || || |||||| | || || ||||| Sbjct 691940 ATATGTTGATCAGGGTGGTAACAAACGCCCGGGTGCTTTTGCTGTTTACCTTGAGCCATG 691881 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 ||||||||| |||| ||||||||||| || || || ||| || || || ||| | || Sbjct 691880 GCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAGAACCACGGTAAGGAAGAAGTTCG 691821 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG--AG 363984 ||||| ||||| |||||||| | ||| || |||| || |||||||| || | | Sbjct 691820 CGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTCGAAAA 691761 Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | |||| ||| | || | ||||| | ||||| || ||| | | ||||| | Sbjct 691760 GAATG-GAGAA-TGGACTCTTATGTGCCCCAATGAATGCCCTGGTTTGGCAGATGTTTAT 691703 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || || | || || || ||||| | |||||| || ||||||| ||| ||||| Sbjct 691702 GGCGAGGAGTTTGAGGCCCTCTACGAGAGTTATGAAAAGGCAGGAAAGGGTCGCAAGACT 691643 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || || ||||| |||| | || | || | || | || || |||| || Sbjct 691642 ATCAAGGCTCAAAAGCTCTGGTACTCTATTCTTGAGGCTCAAACCGAAACCGGAAATCCT 691583 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| | ||||||||| | |||||| ||| |||||| || |||||||||| ||| Sbjct 691582 TTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTTGGTACTATT 691523 Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | |||| |||| | || || ||||| | || ||| | || || || ||| ||| Sbjct 691522 C-GCAGCTCCAACTTGTGCACAGAGATCGTCGAGTACTCTGCACCAGATGAGGTTGCTTG 691464 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACTTTTGA 364337 |||||| | || || || || || || | || | | || || || |||| ||| Sbjct 691463 CTGTAACTTGGCTTCAATTGCTCTACCAACTTTCGTCAACATGAATGAGGGAACTTATGA 691404 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCG-ACAAGGTTATCG 364396 ||| | ||| | || || | | || | || || || | ||||| | || | Sbjct 691403 TTTCCAAAAGCTTCACGAGGTTGTCCA-AGTGGTCGTTAGAAACTTGAACAAGATCATTG 691345 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCC-GAGCGTTCTAATATGCGTCATCGCCCGATT 364455 | | || ||||||||| | | |||||| || | | ||| | |||||||| || || Sbjct 691344 ATATCAACTATTATCCAGTACAAGAAGCCAGAAGGAGC-AATTTCCGTCATCGACCTATC 691286 Query 364456 GGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCG 364515 | | ||||||| || || || ||||| | ||| || || | |||| || ||| Sbjct 691285 GCTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTCCATTCGACTCG 691226 Query 364516 CCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACT 364575 || || || || || | |||| ||||| || || || || || |||| Sbjct 691225 CCAGAAGCCAAGCACCTCAACATCCAGATTTTTGAGACCATCTACCACGCTGCCTTGACC 691166 Query 364576 GCTTCGTGT-GATTTGGCAAA--AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632 | || ||| || | ||||| ||| || |||| ||||| | || || || Sbjct 691165 TCATC-TGTCGAGATCGCAAAGGAAC--TTGGCCCGTACGAAACTTACCAAGGCTCTCCA 691109 Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692 | || |||| || |||| | ||| | ||| ||||| || |||| ||| | Sbjct 691108 GTCTCCAAGGGTGAACTCCAATATGACATGTGGGGCGTCACTCCTTCTGATTTGTGGGAT 691049 Query 364693 TGGGATACGCTACGTTCCAA--CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAG 364750 |||| || || | ||| | | ||| | || || | ||||||||| || || | Sbjct 691048 TGGG--ACTCTTTGAAGCAATCCATCAAGCAACACGGAATTCGCAACTCTCTTCTTGTTG 690991 Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810 | || ||||| || ||| ||| |||| |||||||| |||||| || || ||||| | Sbjct 690990 CACCTATGCCTACTGCTAGCACTTCACAAATCCTCGGTTTCAACGAATGTTTTGAACCAT 690931 Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870 || || | || ||||| || ||||| |||||||||| | || ||||| | Sbjct 690930 ACACTTCAAACATCTACTCACGTCGTGTTCTGGCCGGAGAATTCCAAGTTGTTAACCCAT 690871 Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930 || |||| || ||| || || || ||| ||||| |||||||||| ||||| Sbjct 690870 GGCTCCTCAAAGACCTTGTTGATATGGGTCTTTGGTCTGACAACATGAAGAACCGTATCA 690811 Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990 | || | | ||| ||| | || ||||| || |||||| || | ||| | ||| Sbjct 690810 TTGCTGATGGTGGATCTATTCAAAACATCCCCAACATTCCAGCTGACATCAAGGCCCTTT 690751 Query 364991 ACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTG 365050 |||| || || ||||||||||| ||||| | || | ||||| || |||||||||| Sbjct 690750 ACAAGACTGTTTGGGAAATTTCTCAACGAACAATTGTTCAAATGGCTGCTGATCGCGGTG 690691 Query 365051 CTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGC 365110 | |||||| ||| || || | ||| | ||||| | || || | |||| Sbjct 690690 CATTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAATGGGCAAGA 690631 Query 365111 TTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | ||||| ||||| || || ||||||| ||| | ||||| || Sbjct 690630 TCACATCTATGCACTTTGCTGGATGGAAATTGGGTTTGAAGACCGG 690585 >seq6 Length=1347266 Score = 84.2 bits (92), Expect = 6e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 65867 GTGCGTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGAC 65926 ||| |||||| | || || ||||| || |||| ||| ||| || || ||||||| Sbjct 903485 GTGAGTTACGGACAGTACCATCATATTTAGCCATAACATCCTCAAGAGCTTTGACAAGAC 903426 Query 65927 AACGCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCC 65986 ||| || || |||||| | | |||||| || ||||||||||| | | ||||||||| | Sbjct 903425 GACGTTGAATATAACCAGTTTCTGCAGTCTTAACCGCGGTATCGATCAAACCTTCACGAC 903366 Query 65987 CGGACATTGCAGAAAAGAAAAACTCAGTCGG 66017 | | ||| || ||||| ||||| || || Sbjct 903365 CAGCCATGGCGTGGAAGAAGAACTCTGTTGG 903335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303343196387186