Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq3 316 5e-81
seq6 84.2 6e-11
>seq3
Length=2126074
Score = 316 bits (350), Expect = 5e-81
Identities = 1158/1786 (65%), Gaps = 34/1786 (2%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450
||||| | ||||| | ||| ||| || || | ||| | ||||| | ||| ||
Sbjct 692356 TTCGGGTTCAAGACCCTTGAGCGATCATATCTTTTACGTCTTGATGGTAAAGTTGCGGAG 692297
Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510
|| || || || ||| | ||||||||||| | ||||| || | ||| | ||
Sbjct 692296 CGTCCTCAACAAATGATCATGCGTGTTGCCGTGGGTATTCACGGTGATGATATCGAAAGT 692237
Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACAA 363568
|| || |||||||| || ||| | || | ||| || || || || | |||||
Sbjct 692236 GCTATCGAAACATACAA-CTTG-ATGTCAAACAAGTACTTTACACATGCTTCCCCAACGC 692179
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
| | ||| || |||| | |||| | || || ||||| || | | ||||| |
Sbjct 692178 TCTTTTCTGCGGGTACTCCACAAGCACAACTTTCGTCGTGCTTCCTCATCGACATGAAAG 692119
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
| ||| || || ||||||| || || | |||| |||||| | || || |||||||
Sbjct 692118 AGGATAGTATTGATGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGAATG 692059
Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATTCGCGG 363746
| || || |||||| | || |||| | ||||| || | || ||||| |||
Sbjct 692058 CCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGCA--TACATCGCCGG 692001
Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806
|| ||| | || ||||| | |||||||||||||| || || |||| ||||| ||
Sbjct 692000 TACTAATGGAAATTCCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCAAG 691941
Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866
|| || || |||||||| || ||| || || |||||| | || || |||||
Sbjct 691940 ATATGTTGATCAGGGTGGTAACAAACGCCCGGGTGCTTTTGCTGTTTACCTTGAGCCATG 691881
Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926
||||||||| |||| ||||||||||| || || || ||| || || || ||| | ||
Sbjct 691880 GCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAGAACCACGGTAAGGAAGAAGTTCG 691821
Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG--AG 363984
||||| ||||| |||||||| | ||| || |||| || |||||||| || | |
Sbjct 691820 CGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTCGAAAA 691761
Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044
| | | |||| ||| | || | ||||| | ||||| || ||| | | ||||| |
Sbjct 691760 GAATG-GAGAA-TGGACTCTTATGTGCCCCAATGAATGCCCTGGTTTGGCAGATGTTTAT 691703
Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104
|| || || | || || || ||||| | |||||| || ||||||| ||| |||||
Sbjct 691702 GGCGAGGAGTTTGAGGCCCTCTACGAGAGTTATGAAAAGGCAGGAAAGGGTCGCAAGACT 691643
Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164
|| || || ||||| |||| | || | || | || | || || |||| ||
Sbjct 691642 ATCAAGGCTCAAAAGCTCTGGTACTCTATTCTTGAGGCTCAAACCGAAACCGGAAATCCT 691583
Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224
| ||| | ||||||||| | |||||| ||| |||||| || |||||||||| |||
Sbjct 691582 TTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTTGGTACTATT 691523
Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283
| |||| |||| | || || ||||| | || ||| | || || || ||| |||
Sbjct 691522 C-GCAGCTCCAACTTGTGCACAGAGATCGTCGAGTACTCTGCACCAGATGAGGTTGCTTG 691464
Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACTTTTGA 364337
|||||| | || || || || || || | || | | || || || |||| |||
Sbjct 691463 CTGTAACTTGGCTTCAATTGCTCTACCAACTTTCGTCAACATGAATGAGGGAACTTATGA 691404
Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCG-ACAAGGTTATCG 364396
||| | ||| | || || | | || | || || || | ||||| | || |
Sbjct 691403 TTTCCAAAAGCTTCACGAGGTTGTCCA-AGTGGTCGTTAGAAACTTGAACAAGATCATTG 691345
Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCC-GAGCGTTCTAATATGCGTCATCGCCCGATT 364455
| | || ||||||||| | | |||||| || | | ||| | |||||||| || ||
Sbjct 691344 ATATCAACTATTATCCAGTACAAGAAGCCAGAAGGAGC-AATTTCCGTCATCGACCTATC 691286
Query 364456 GGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCG 364515
| | ||||||| || || || ||||| | ||| || || | |||| || |||
Sbjct 691285 GCTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTCCATTCGACTCG 691226
Query 364516 CCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACT 364575
|| || || || || | |||| ||||| || || || || || ||||
Sbjct 691225 CCAGAAGCCAAGCACCTCAACATCCAGATTTTTGAGACCATCTACCACGCTGCCTTGACC 691166
Query 364576 GCTTCGTGT-GATTTGGCAAA--AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632
| || ||| || | ||||| ||| || |||| ||||| | || || ||
Sbjct 691165 TCATC-TGTCGAGATCGCAAAGGAAC--TTGGCCCGTACGAAACTTACCAAGGCTCTCCA 691109
Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692
| || |||| || |||| | ||| | ||| ||||| || |||| ||| |
Sbjct 691108 GTCTCCAAGGGTGAACTCCAATATGACATGTGGGGCGTCACTCCTTCTGATTTGTGGGAT 691049
Query 364693 TGGGATACGCTACGTTCCAA--CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAG 364750
|||| || || | ||| | | ||| | || || | ||||||||| || || |
Sbjct 691048 TGGG--ACTCTTTGAAGCAATCCATCAAGCAACACGGAATTCGCAACTCTCTTCTTGTTG 690991
Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810
| || ||||| || ||| ||| |||| |||||||| |||||| || || ||||| |
Sbjct 690990 CACCTATGCCTACTGCTAGCACTTCACAAATCCTCGGTTTCAACGAATGTTTTGAACCAT 690931
Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870
|| || | || ||||| || ||||| |||||||||| | || ||||| |
Sbjct 690930 ACACTTCAAACATCTACTCACGTCGTGTTCTGGCCGGAGAATTCCAAGTTGTTAACCCAT 690871
Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930
|| |||| || ||| || || || ||| ||||| |||||||||| |||||
Sbjct 690870 GGCTCCTCAAAGACCTTGTTGATATGGGTCTTTGGTCTGACAACATGAAGAACCGTATCA 690811
Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990
| || | | ||| ||| | || ||||| || |||||| || | ||| | |||
Sbjct 690810 TTGCTGATGGTGGATCTATTCAAAACATCCCCAACATTCCAGCTGACATCAAGGCCCTTT 690751
Query 364991 ACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTG 365050
|||| || || ||||||||||| ||||| | || | ||||| || ||||||||||
Sbjct 690750 ACAAGACTGTTTGGGAAATTTCTCAACGAACAATTGTTCAAATGGCTGCTGATCGCGGTG 690691
Query 365051 CTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGC 365110
| |||||| ||| || || | ||| | ||||| | || || | ||||
Sbjct 690690 CATTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAATGGGCAAGA 690631
Query 365111 TTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| ||||| ||||| || || ||||||| ||| | ||||| ||
Sbjct 690630 TCACATCTATGCACTTTGCTGGATGGAAATTGGGTTTGAAGACCGG 690585
>seq6
Length=1347266
Score = 84.2 bits (92), Expect = 6e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 65867 GTGCGTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGAC 65926
||| |||||| | || || ||||| || |||| ||| ||| || || |||||||
Sbjct 903485 GTGAGTTACGGACAGTACCATCATATTTAGCCATAACATCCTCAAGAGCTTTGACAAGAC 903426
Query 65927 AACGCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCC 65986
||| || || |||||| | | |||||| || ||||||||||| | | ||||||||| |
Sbjct 903425 GACGTTGAATATAACCAGTTTCTGCAGTCTTAACCGCGGTATCGATCAAACCTTCACGAC 903366
Query 65987 CGGACATTGCAGAAAAGAAAAACTCAGTCGG 66017
| | ||| || ||||| ||||| || ||
Sbjct 903365 CAGCCATGGCGTGGAAGAAGAACTCTGTTGG 903335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303343196387186
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |