Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq34 120 3e-22 seq18 91.5 1e-13 >seq34 Length=376069 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| | ||| || || | || ||||||||||| |||||||| ||| Sbjct 166305 CCACCACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAA 166364 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| || ||||| || ||| |||| || ||||| ||||| || || Sbjct 166365 AGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGA 166424 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | || | || || | ||||| | Sbjct 166425 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACC 166484 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 |||| ||| | ||||| || || || || || ||||| |||||||||||| Sbjct 166485 TCGAGGGTGATAGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 166535 >seq18 Length=877782 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | || |||||||| ||||||||||| || Sbjct 575862 CCACCACGAAGGCGGAGGACGAGATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAG 575921 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || || |||||||||||| | || |||||||| || || ||||| Sbjct 575922 AGGGTGCGACCATCTTCAAGTTGCTTGCCTGCGAAAATCAAACGCTGTTGATCGGGAGGA 575981 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || |||| | || | ||| ||| ||||||||| Sbjct 575982 ATCCCCTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATAGTGTCGCTGGACTCGACC 576041 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || || || Sbjct 576042 TCAAGGGTGATGGTCTTTCCAGT 576064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009124200320