Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq18 111 1e-19
>seq18
Length=877782
Score = 111 bits (122), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | | ||| | |||||| || | ||||| ||||||||||| ||||||||
Sbjct 575121 ACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAATC--- 575177
Query 38150 CAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
||||| | ||| |||| || || || ||||| || || || | || |||||||| |
Sbjct 575178 CAAAAGA-GTTCTGCCGTCCTCCAACTGCTTTCCAGCGAAGATCAATCGCTGTTGATCAG 575236
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
|| | ||| || || ||| ||| || ||| ||||| | | |||||| | ||
Sbjct 575237 GTGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTATCAATAGTATCCGAAGATT 575296
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || |||||||| ||||| || || |||||||| || || || || |||||
Sbjct 575297 CTACCTCTAATGTGATAGTCTTTCCAGTCAAGGTCTTAACAAAGATTTGCAT 575348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334944656808713
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |