Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq18 111 1e-19 >seq18 Length=877782 Score = 111 bits (122), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | |||||| || | ||||| ||||||||||| |||||||| Sbjct 575121 ACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAATC--- 575177 Query 38150 CAAAACACGTT----CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 ||||| | ||| |||| || || || ||||| || || || | || |||||||| | Sbjct 575178 CAAAAGA-GTTCTGCCGTCCTCCAACTGCTTTCCAGCGAAGATCAATCGCTGTTGATCAG 575236 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | ||| || || ||| ||| || ||| ||||| | | |||||| | || Sbjct 575237 GTGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTATCAATAGTATCCGAAGATT 575296 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || |||||||| ||||| || || |||||||| || || || || ||||| Sbjct 575297 CTACCTCTAATGTGATAGTCTTTCCAGTCAAGGTCTTAACAAAGATTTGCAT 575348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944656808713