Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq9 161 1e-34
>seq9
Length=1212739
Score = 161 bits (178), Expect = 1e-34
Identities = 503/781 (64%), Gaps = 66/781 (8%)
Strand=Plus/Minus
Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985
|||||| || || || ||||| || ||| | | | | ||||| |||| ||||
Sbjct 165635 ATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAAAGAGAGCA 165576
Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045
||| ||||| ||||||||||| |||| |||||| |||||||||| | | || |||
Sbjct 165575 AGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACATCTTG 165516
Query 93046 TACT-CTACTATTTGG-TGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCG 93103
|| || | ||||| ||| || || || | | | | | ||| || || |||
Sbjct 165515 GACGGCT--TGTTTGGATGGGCGGTGCTTGAGATGAGAGAATAGGAGGCATGCGAAATCG 165458
Query 93104 GTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGT 93163
|| || | |||||| || || || || | || ||| ||| || | || | | ||
Sbjct 165457 GTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGA 165398
Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223
|| || || |||||||| || ||||| |||||| ||||| || || |||||||| ||
Sbjct 165397 CCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTTCAACA 165338
Query 93224 GCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGCTGATCCATTTTAA 93282
|| || ||||| || | ||||| ||||| | | | ||| || | |||||||| |
Sbjct 165337 GCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCA-ATCCATTTGAC 165279
Query 93283 AGCCCAATCGGCTTTTTTCTTAATACAAGG---------------TAG------TGTT-- 93319
|||||||||||| ||||||||||| ||||| ||| ||||
Sbjct 165278 AGCCCAATCGGCCTTTTTCTTAATGCAAGGAACTTTCAAAATTGTTAGATGATTTGTTGT 165219
Query 93320 ------------------------------TCGATAGCGTTAAATAGGTAATCTCGCTCG 93349
|| |||||||| || |||| || || | |
Sbjct 165218 ATGTTGGTGTAGGGTTATGGCTTACTGGTGTCAATAGCGTTGAAAAGGT-ATGTCTTTTG 165160
Query 93350 TCC--GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCT 93407
| | | || | |||||||| ||||| | ||||| || |||| || |||| ||||
Sbjct 165159 TGCTTGCTCCTTG-ATGTATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGGATGTTCT 165101
Query 93408 CCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAA 93467
|||| | |||||| |||||||| ||| || || | || || ||||| | | |
Sbjct 165100 CCATCATGACTTGGAAACCGTAGAAGAATCGTGCCTCTGCAATTTGAACTTCATTACTGA 165041
Query 93468 ATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATAT 93527
||||| || | || || ||||| || |||||||||||||| || || || | | |
Sbjct 165040 ATCTCGAGACTAAGTTCTCGTTGACAATTCCATCGGATGCTGCGAAGAATGCGAGAACGT 164981
Query 93528 GCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTG 93584
| || || | ||| || || || ||| |||| ||||||| ||||| ||||
Sbjct 164980 GAGAGATGAAGTAACGCTCGTCGTCATTGAGCCTGTTATTCCAATCGTGAAGATCCTTTG 164921
Query 93585 AAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATA 93644
| | || | ||||| | ||||| || || || ||||| ||||||||||| | ||| |
Sbjct 164920 ACAAGTCAATCTCTTCTGCGGTCCAGAAGGAGGCCTCTGCCTTTTTGTACATCTGCCAGA 164861
Query 93645 T 93645
|
Sbjct 164860 T 164860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556856463446520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |