Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq9 161 1e-34 >seq9 Length=1212739 Score = 161 bits (178), Expect = 1e-34 Identities = 503/781 (64%), Gaps = 66/781 (8%) Strand=Plus/Minus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985 |||||| || || || ||||| || ||| | | | | ||||| |||| |||| Sbjct 165635 ATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAAAGAGAGCA 165576 Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 ||| ||||| ||||||||||| |||| |||||| |||||||||| | | || ||| Sbjct 165575 AGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACATCTTG 165516 Query 93046 TACT-CTACTATTTGG-TGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCG 93103 || || | ||||| ||| || || || | | | | | ||| || || ||| Sbjct 165515 GACGGCT--TGTTTGGATGGGCGGTGCTTGAGATGAGAGAATAGGAGGCATGCGAAATCG 165458 Query 93104 GTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGT 93163 || || | |||||| || || || || | || ||| ||| || | || | | || Sbjct 165457 GTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGA 165398 Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223 || || || |||||||| || ||||| |||||| ||||| || || |||||||| || Sbjct 165397 CCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTTCAACA 165338 Query 93224 GCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGCTGATCCATTTTAA 93282 || || ||||| || | ||||| ||||| | | | ||| || | |||||||| | Sbjct 165337 GCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCA-ATCCATTTGAC 165279 Query 93283 AGCCCAATCGGCTTTTTTCTTAATACAAGG---------------TAG------TGTT-- 93319 |||||||||||| ||||||||||| ||||| ||| |||| Sbjct 165278 AGCCCAATCGGCCTTTTTCTTAATGCAAGGAACTTTCAAAATTGTTAGATGATTTGTTGT 165219 Query 93320 ------------------------------TCGATAGCGTTAAATAGGTAATCTCGCTCG 93349 || |||||||| || |||| || || | | Sbjct 165218 ATGTTGGTGTAGGGTTATGGCTTACTGGTGTCAATAGCGTTGAAAAGGT-ATGTCTTTTG 165160 Query 93350 TCC--GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCT 93407 | | | || | |||||||| ||||| | ||||| || |||| || |||| |||| Sbjct 165159 TGCTTGCTCCTTG-ATGTATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGGATGTTCT 165101 Query 93408 CCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAA 93467 |||| | |||||| |||||||| ||| || || | || || ||||| | | | Sbjct 165100 CCATCATGACTTGGAAACCGTAGAAGAATCGTGCCTCTGCAATTTGAACTTCATTACTGA 165041 Query 93468 ATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATAT 93527 ||||| || | || || ||||| || |||||||||||||| || || || | | | Sbjct 165040 ATCTCGAGACTAAGTTCTCGTTGACAATTCCATCGGATGCTGCGAAGAATGCGAGAACGT 164981 Query 93528 GCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTG 93584 | || || | ||| || || || ||| |||| ||||||| ||||| |||| Sbjct 164980 GAGAGATGAAGTAACGCTCGTCGTCATTGAGCCTGTTATTCCAATCGTGAAGATCCTTTG 164921 Query 93585 AAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATA 93644 | | || | ||||| | ||||| || || || ||||| ||||||||||| | ||| | Sbjct 164920 ACAAGTCAATCTCTTCTGCGGTCCAGAAGGAGGCCTCTGCCTTTTTGTACATCTGCCAGA 164861 Query 93645 T 93645 | Sbjct 164860 T 164860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856463446520