Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq9 181 2e-40
>seq9
Length=1212739
Score = 181 bits (200), Expect = 2e-40
Identities = 359/518 (69%), Gaps = 15/518 (3%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691
|| ||||| ||||| ||||| || ||||| |||| ||||| || || || | | ||
Sbjct 165249 CCTTGCATTAAGAAAAAGGCCGATTGGGCTGTCAAATGGATTGA-AGATAAGAGCTCTAC 165307
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|| | | | || || || || |||| || || || ||||||||||| || | ||
Sbjct 165308 CTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGATCTTT 165367
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
|| || |||||||||||||| || ||| || ||| | |||||||||||||| ||||
Sbjct 165368 TGCATCAATCTTCTGGCTCAAAAAGCGTGGTCTC-ATGGCTGGACTCACCTTCTCCAACG 165426
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
|||||||| | | || || || || || | || || || |||||||| ||||| |
Sbjct 165427 AACTCATCTCCCGTGATGAAGGTCTCCACACCGATTTCGCATGCCTCCTATTCTCT---C 165483
Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930
| |||| |||| || || || | |||| | |||| || || ||||| || |
Sbjct 165484 ATCTCAAGCACCGCCCATCCAAACAAGCCGTCCAAGATGTCATTACCGAAGCCGTTGAAA 165543
Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC- 42989
|||| | || ||| | || || | || || || || | ||||||||| | ||
Sbjct 165544 TCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGCTCTCTTTTAGGCATGAACT-CTACT 165602
Query 42990 CTCATGT-GCAAGTACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTC 43046
|||||| |||| ||||| ||| |||||| || | ||| ||| ||| ||||| |
Sbjct 165603 CTCATGAAGCAA-TACATTGAGTTCGTCGCTGATCGTCTGCTGGTTGCTT--TGGGTAAC 165659
Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106
| ||||||| | | ||| |||||||| |||||||||||||| |||| |||
Sbjct 165660 GACAAAGTCTACAAGTCTGCCAACCCATTCGACTTCATGGAGAACATCTCCTTGGCTGGC 165719
Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
||||||||||| ||||||||| | || | || |||||
Sbjct 165720 AAGACCAACTTCTTCGAGAAGAGAGTTGGAGATTACCA 165757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944331845958480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |