Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq9 181 2e-40 >seq9 Length=1212739 Score = 181 bits (200), Expect = 2e-40 Identities = 359/518 (69%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691 || ||||| ||||| ||||| || ||||| |||| ||||| || || || | | || Sbjct 165249 CCTTGCATTAAGAAAAAGGCCGATTGGGCTGTCAAATGGATTGA-AGATAAGAGCTCTAC 165307 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || |||| || || || ||||||||||| || | || Sbjct 165308 CTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGATCTTT 165367 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 || || |||||||||||||| || ||| || ||| | |||||||||||||| |||| Sbjct 165368 TGCATCAATCTTCTGGCTCAAAAAGCGTGGTCTC-ATGGCTGGACTCACCTTCTCCAACG 165426 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||||||| | | || || || || || | || || || |||||||| ||||| | Sbjct 165427 AACTCATCTCCCGTGATGAAGGTCTCCACACCGATTTCGCATGCCTCCTATTCTCT---C 165483 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| |||| || || || | |||| | |||| || || ||||| || | Sbjct 165484 ATCTCAAGCACCGCCCATCCAAACAAGCCGTCCAAGATGTCATTACCGAAGCCGTTGAAA 165543 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC- 42989 |||| | || ||| | || || | || || || || | ||||||||| | || Sbjct 165544 TCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGCTCTCTTTTAGGCATGAACT-CTACT 165602 Query 42990 CTCATGT-GCAAGTACATCCAGTACGTCGCCGACCATCTCCTG--TGCCAGATGGGTCTC 43046 |||||| |||| ||||| ||| |||||| || | ||| ||| ||| ||||| | Sbjct 165603 CTCATGAAGCAA-TACATTGAGTTCGTCGCTGATCGTCTGCTGGTTGCTT--TGGGTAAC 165659 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 | ||||||| | | ||| |||||||| |||||||||||||| |||| ||| Sbjct 165660 GACAAAGTCTACAAGTCTGCCAACCCATTCGACTTCATGGAGAACATCTCCTTGGCTGGC 165719 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||| ||||||||| | || | || ||||| Sbjct 165720 AAGACCAACTTCTTCGAGAAGAGAGTTGGAGATTACCA 165757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944331845958480