Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq15 87.8 2e-12
>seq15
Length=937851
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416
||||||||||| |||| ||||| || || | |||||||||| | || |||
Sbjct 876590 ACATAAAATTGCGCAAACATATGACAAGGTGGTAACGCCATCAACTTAATATCTGCCACA 876531
Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTA--TTAAATCCACAA 20474
||||| |||| | ||| ||||| ||||| || ||||| || | || || ||||
Sbjct 876530 TTCCATGCACTTAGAATAATTCTCCTATCCCATGGGTTATTCTTAAGCTTCCAT--ACAA 876473
Query 20475 TGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCG 20534
| | || || ||| |||| || || |||||||| || | || || || | ||| |
Sbjct 876472 TTTCCGCCAGTTGATCAACACCTTGTCCTGTATAATCTGTTTCGGCATCAATGTATTTAG 876413
Query 20535 CCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583
| || || || | ||| |||||||| || ||||| || ||||| || ||
Sbjct 876412 CGCCGAAATGTCGCCATTGGAAACCATACACAGGACCTAAATCTCCTTC 876364
Score = 82.4 bits (90), Expect = 7e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 20198 TGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGC 20257
|| |||||||||| || ||| |||| || ||| ||||| | | ||||||||
Sbjct 876818 TGTGCATCTCCCATAGTATGAGTAAATGTACCAGGTGTAAGATCGCATGCGTGAGCAAGT 876759
Query 20258 ATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCC 20317
|||| ||||| |||| ||| || |||||||||||||| || | ||||||||| |
Sbjct 876758 ATATGAGTTAGAAGGGCGTAGGAAGCGATGTTAAAAGGAACCCCAAGACCCATGTCGCAA 876699
Query 20318 GACCTCTGATACAGCTGACA 20337
|| | ||||| ||||||||
Sbjct 876698 GAACGTTGATAAAGCTGACA 876679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441369362809320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |