Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq15 87.8 2e-12 >seq15 Length=937851 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 ||||||||||| |||| ||||| || || | |||||||||| | || ||| Sbjct 876590 ACATAAAATTGCGCAAACATATGACAAGGTGGTAACGCCATCAACTTAATATCTGCCACA 876531 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTA--TTAAATCCACAA 20474 ||||| |||| | ||| ||||| ||||| || ||||| || | || || |||| Sbjct 876530 TTCCATGCACTTAGAATAATTCTCCTATCCCATGGGTTATTCTTAAGCTTCCAT--ACAA 876473 Query 20475 TGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCG 20534 | | || || ||| |||| || || |||||||| || | || || || | ||| | Sbjct 876472 TTTCCGCCAGTTGATCAACACCTTGTCCTGTATAATCTGTTTCGGCATCAATGTATTTAG 876413 Query 20535 CCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 | || || || | ||| |||||||| || ||||| || ||||| || || Sbjct 876412 CGCCGAAATGTCGCCATTGGAAACCATACACAGGACCTAAATCTCCTTC 876364 Score = 82.4 bits (90), Expect = 7e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 20198 TGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGC 20257 || |||||||||| || ||| |||| || ||| ||||| | | |||||||| Sbjct 876818 TGTGCATCTCCCATAGTATGAGTAAATGTACCAGGTGTAAGATCGCATGCGTGAGCAAGT 876759 Query 20258 ATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCC 20317 |||| ||||| |||| ||| || |||||||||||||| || | ||||||||| | Sbjct 876758 ATATGAGTTAGAAGGGCGTAGGAAGCGATGTTAAAAGGAACCCCAAGACCCATGTCGCAA 876699 Query 20318 GACCTCTGATACAGCTGACA 20337 || | ||||| |||||||| Sbjct 876698 GAACGTTGATAAAGCTGACA 876679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441369362809320