Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 145 9e-30 seq9 134 2e-26 >seq3 Length=2126074 Score = 145 bits (160), Expect = 9e-30 Identities = 915/1443 (63%), Gaps = 35/1443 (2%) Strand=Plus/Plus Query 113603 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTG 113662 |||||||| || ||||| | ||| ||||| || | ||||| || | | |||| Sbjct 690576 TAGTACATTCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTG 690635 Query 113663 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCA 113722 | ||| ||| | |||| | |||||| ||| ||||||||||| || || Sbjct 690636 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCG 690695 Query 113723 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 113780 ||||| || ||||| | || || || ||| | || ||||||| ||||| |||| | Sbjct 690696 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAA 690753 Query 113781 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCA 113840 || ||| || ||| |||| || | ||| ||||| || || ||||| | | | Sbjct 690754 GGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCAGCAATGA 690813 Query 113841 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATG 113898 | | | |||||| | | ||||| ||||| || | || || | | ||| ||| Sbjct 690814 TACGGTTCTTCATGTTGTCAGACCAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATG 690873 Query 113899 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGGTCGTGT 113957 | | ||||| || || || || || || | | || ||||| || | |||| Sbjct 690874 GGT--TAACAACTTGGAATTCTCCGGCCAGAACACGACGTGAG-TAGATGTTTGAAGTGT 690930 Query 113958 ATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTG 114017 |||| ||||| || || ||| ||| | |||||| | ||| || || ||||| |||| Sbjct 690931 ATGGTTCAAAACATTCGTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTG 690990 Query 114018 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT 114077 | | ||||| ||| || | || | || | | ||| || ||| | | |||||| | Sbjct 690991 CAACAAGAAGAGAGTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAAT 691050 Query 114078 CGTAGT--TGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGG 114134 | | | || || | ||| ||||| ||| | ||||| ||| | |||| Sbjct 691051 CCCACAAATCAGAAGGAGTGACGCCC---CACATGTCATATTGGAGTTCACCCTTGGAGA 691107 Query 114135 CTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGG-AGCTCGCC 114193 |||| || || | | || ||||| ||||| ||| || | ||| || | Sbjct 691108 CTGGAGAGCCTTGGTAAGTTTCGTACGGGCCAAGTTCCTTTGCGATCTCGACAGATGAGG 691167 Query 114194 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 114253 || ||| | ||||| || || ||||||||||| | || | |||||| || Sbjct 691168 TCAAGG-CAGCGTGGTAGATGGTCTCAAAAATCTGGATGTTGAGGTGCTTGGCTTCTGGC 691226 Query 114254 GAATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 114312 || || || | || || | || ||| |||| || |||||||| ||||| | | Sbjct 691227 GAGTCGAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGC 691285 Query 114313 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATC 114372 || || ||||| | | ||| | ||| || | || |||||| | || |||| Sbjct 691286 GATAGGTCGATGACGGAAATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATC 691345 Query 114373 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 114432 || | | | || | ||| | ||| || | | || |||||||||| | |||| Sbjct 691346 AATGATCTTGTTCAAGTTTCTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATC 691405 Query 114433 AAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 114489 | || | | ||| ||||| |||| | | || || || ||||| |||| ||||| Sbjct 691406 ATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTACA 691462 Query 114490 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 114549 || |||||| ||| |||||| | || || || ||||| || || || Sbjct 691463 GCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCG 691522 Query 114550 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 114609 ||| || || | ||||||||| || ||| |||| || ||||| |||||||||||| | Sbjct 691523 AATAGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAA 691582 Query 114610 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCA 114668 || | || || || ||||| | || ||||||| | ||||| | | | | || | | Sbjct 691583 AGGATTTCCGGTTTCGGTTTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTG-A 691641 Query 114669 CAGTGGCGTTGGCTCGCCCCT-CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 114727 ||| | | | | ||| ||| || || | ||||||||| |||||||| || Sbjct 691642 TAGTCTTGC-GACCCTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTCCTCG 691700 Query 114728 CCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACC 114786 || | |||| | || || || || || ||||| | |||| ||||| ||| Sbjct 691701 CCATAAACATCTGCCAAACCAGG-GCATTCATTGGGGCACATAAGAGTCCATTCTCCATT 691759 Query 114787 CTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACA 114846 || || |||||||||||||| | || || ||||| | || |||||||||| || Sbjct 691760 CTTTTCGACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGC 691819 Query 114847 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 114906 |||| ||||||| | || || || || | || | ||| || | | ||| || || Sbjct 691820 GCGAACTTCTTCCTTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATG 691879 Query 114907 CCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATA 114963 ||| || || ||||| || || | | ||| || |||| |||| | ||||| Sbjct 691880 CCATGGCTCAAGGTAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATA 691939 Query 114964 CCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT 115023 || || ||| || || || |||||||| |||| ||||||| || | ||||| || Sbjct 691940 TCTTGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGT 691999 Query 115024 CCC 115026 || Sbjct 692000 ACC 692002 >seq9 Length=1212739 Score = 134 bits (148), Expect = 2e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||||||||| || ||||||||||||||||| || |||||| ||||| | ||||||||| Sbjct 165455 GTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACC 165396 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 ||||| || | |||||| || | ||| || || ||||||||||| || || ||| Sbjct 165395 ACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTTCAACAGC 165336 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCGCGACTTTGTGTCAAACCACTTCATCG 126236 ||||| |||| |||||| | |||||||| || || ||| |||| ||| || | | Sbjct 165335 GGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGC-TCTTATCTTCAATCCATTTGACAG 165277 Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 |||| | |||||||||| || || || || Sbjct 165276 CCCAATCGGCCTTTTTCTTAATGCAAGGAAC 165246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597348948108840