Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 9e-30
seq9 134 2e-26
>seq3
Length=2126074
Score = 145 bits (160), Expect = 9e-30
Identities = 915/1443 (63%), Gaps = 35/1443 (2%)
Strand=Plus/Plus
Query 113603 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTG 113662
|||||||| || ||||| | ||| ||||| || | ||||| || | | ||||
Sbjct 690576 TAGTACATTCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTG 690635
Query 113663 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCA 113722
| ||| ||| | |||| | |||||| ||| ||||||||||| || ||
Sbjct 690636 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCG 690695
Query 113723 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 113780
||||| || ||||| | || || || ||| | || ||||||| ||||| |||| |
Sbjct 690696 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAA 690753
Query 113781 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCA 113840
|| ||| || ||| |||| || | ||| ||||| || || ||||| | | |
Sbjct 690754 GGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCAGCAATGA 690813
Query 113841 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATG 113898
| | | |||||| | | ||||| ||||| || | || || | | ||| |||
Sbjct 690814 TACGGTTCTTCATGTTGTCAGACCAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATG 690873
Query 113899 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGGTCGTGT 113957
| | ||||| || || || || || || | | || ||||| || | ||||
Sbjct 690874 GGT--TAACAACTTGGAATTCTCCGGCCAGAACACGACGTGAG-TAGATGTTTGAAGTGT 690930
Query 113958 ATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTG 114017
|||| ||||| || || ||| ||| | |||||| | ||| || || ||||| ||||
Sbjct 690931 ATGGTTCAAAACATTCGTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTG 690990
Query 114018 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT 114077
| | ||||| ||| || | || | || | | ||| || ||| | | |||||| |
Sbjct 690991 CAACAAGAAGAGAGTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAAT 691050
Query 114078 CGTAGT--TGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGG 114134
| | | || || | ||| ||||| ||| | ||||| ||| | ||||
Sbjct 691051 CCCACAAATCAGAAGGAGTGACGCCC---CACATGTCATATTGGAGTTCACCCTTGGAGA 691107
Query 114135 CTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGG-AGCTCGCC 114193
|||| || || | | || ||||| ||||| ||| || | ||| || |
Sbjct 691108 CTGGAGAGCCTTGGTAAGTTTCGTACGGGCCAAGTTCCTTTGCGATCTCGACAGATGAGG 691167
Query 114194 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 114253
|| ||| | ||||| || || ||||||||||| | || | |||||| ||
Sbjct 691168 TCAAGG-CAGCGTGGTAGATGGTCTCAAAAATCTGGATGTTGAGGTGCTTGGCTTCTGGC 691226
Query 114254 GAATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 114312
|| || || | || || | || ||| |||| || |||||||| ||||| | |
Sbjct 691227 GAGTCGAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGC 691285
Query 114313 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATC 114372
|| || ||||| | | ||| | ||| || | || |||||| | || ||||
Sbjct 691286 GATAGGTCGATGACGGAAATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATC 691345
Query 114373 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 114432
|| | | | || | ||| | ||| || | | || |||||||||| | ||||
Sbjct 691346 AATGATCTTGTTCAAGTTTCTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATC 691405
Query 114433 AAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 114489
| || | | ||| ||||| |||| | | || || || ||||| |||| |||||
Sbjct 691406 ATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTACA 691462
Query 114490 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 114549
|| |||||| ||| |||||| | || || || ||||| || || ||
Sbjct 691463 GCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCG 691522
Query 114550 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 114609
||| || || | ||||||||| || ||| |||| || ||||| |||||||||||| |
Sbjct 691523 AATAGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAA 691582
Query 114610 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCA 114668
|| | || || || ||||| | || ||||||| | ||||| | | | | || | |
Sbjct 691583 AGGATTTCCGGTTTCGGTTTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTG-A 691641
Query 114669 CAGTGGCGTTGGCTCGCCCCT-CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 114727
||| | | | | ||| ||| || || | ||||||||| |||||||| ||
Sbjct 691642 TAGTCTTGC-GACCCTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTCCTCG 691700
Query 114728 CCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACC 114786
|| | |||| | || || || || || ||||| | |||| ||||| |||
Sbjct 691701 CCATAAACATCTGCCAAACCAGG-GCATTCATTGGGGCACATAAGAGTCCATTCTCCATT 691759
Query 114787 CTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACA 114846
|| || |||||||||||||| | || || ||||| | || |||||||||| ||
Sbjct 691760 CTTTTCGACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGC 691819
Query 114847 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 114906
|||| ||||||| | || || || || | || | ||| || | | ||| || ||
Sbjct 691820 GCGAACTTCTTCCTTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATG 691879
Query 114907 CCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATA 114963
||| || || ||||| || || | | ||| || |||| |||| | |||||
Sbjct 691880 CCATGGCTCAAGGTAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATA 691939
Query 114964 CCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT 115023
|| || ||| || || || |||||||| |||| ||||||| || | ||||| ||
Sbjct 691940 TCTTGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGT 691999
Query 115024 CCC 115026
||
Sbjct 692000 ACC 692002
>seq9
Length=1212739
Score = 134 bits (148), Expect = 2e-26
Identities = 158/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
||||||||| || ||||||||||||||||| || |||||| ||||| | |||||||||
Sbjct 165455 GTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACC 165396
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
||||| || | |||||| || | ||| || || ||||||||||| || || |||
Sbjct 165395 ACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTTCAACAGC 165336
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCGCGACTTTGTGTCAAACCACTTCATCG 126236
||||| |||| |||||| | |||||||| || || ||| |||| ||| || | |
Sbjct 165335 GGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGC-TCTTATCTTCAATCCATTTGACAG 165277
Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGAC 126267
|||| | |||||||||| || || || ||
Sbjct 165276 CCCAATCGGCCTTTTTCTTAATGCAAGGAAC 165246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597348948108840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |