Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq18 118 1e-21 seq34 105 7e-18 >seq18 Length=877782 Score = 118 bits (130), Expect = 1e-21 Identities = 170/237 (72%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032 |||||| |||| || | | ||| | |||||| ||||| ||||| ||||||||||| ||| Sbjct 575113 ATTTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTG 575172 Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092 ||||| ||||| | |||| || | |||||| |||||||| || | |||||| || Sbjct 575173 TAATCCAAAAGAGTTCTGCCGTCCTCCAACTGCTTTCCAGCGAAGATCAATCGCTGTTGA 575232 Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCT 42151 || | ||| | || |||||| ||| ||| | || | |||| | | | || || Sbjct 575233 TCAGGTGGAATGCCCTCCTTATCC-TGAATCTTAGCCTTGACATTATCAATAGTATCCGA 575291 Query 42152 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || | ||||| || || || || | ||||| |||||||||||||| Sbjct 575292 AGATTCTACCTCTAATGTGATAGTCTTTCCAGTCAAGGTCTTAACAAAGATTTGCAT 575348 >seq34 Length=376069 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| |||||||| || | ||| ||||||||| || ||||| || | || || || | Sbjct 166316 ACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCC 166375 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || || ||||| || ||||| || | |||||| ||||||| ||| | | |||||| Sbjct 166376 ATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTT 166435 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| | | | ||||| || || || |||| ||||| Sbjct 166436 GTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 166495 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||||| || ||||| || ||||| ||||| Sbjct 166496 AGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 166531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543208569730320