Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 >seq3 Length=2126074 Score = 114 bits (126), Expect = 1e-20 Identities = 402/628 (64%), Gaps = 0/628 (0%) Strand=Plus/Minus Query 94003 TGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCC 94062 ||||| | |||||||| | || || || || || ||| | ||| | ||||| Sbjct 692080 TGTGCCATGATCTCAAAGAATGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCT 692021 Query 94063 AGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGG 94122 | ||| | |||||| |||||| ||||| | ||||| || | || || ||||| || Sbjct 692020 ACTGGTGCATACATCGCCGGTACTAATGGAAATTCCAATGGTATTGTTCCCATGCTTCGA 691961 Query 94123 GTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTC 94182 || ||||||||| | || | || || || ||||||||| | | |||| |||| Sbjct 691960 GTTTTCAACAACACTGCAAGATATGTTGATCAGGGTGGTAACAAACGCCCGGGTGCTTTT 691901 Query 94183 GCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAAC 94242 || || || || ||||| ||||| || || || | || | || || || |||||| Sbjct 691900 GCTGTTTACCTTGAGCCATGGCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAGAAC 691841 Query 94243 CACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTT 94302 ||||| || || | | || | || |||||||| || | ||| | || || | Sbjct 691840 CACGGTAAGGAAGAAGTTCGCGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTG 691781 Query 94303 TTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCC 94362 || ||||| || ||||| || || | |||| |||| | || ||||||||||| || Sbjct 691780 TTCATGAAGCGTGTCGAAAAGAATGGAGAATGGACTCTTATGTGCCCCAATGAATGCCCT 691721 Query 94363 GGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAG 94422 || || | || |||| ||| | ||||| | | | || | |||| ||| | Sbjct 691720 GGTTTGGCAGATGTTTATGGCGAGGAGTTTGAGGCCCTCTACGAGAGTTATGAAAAGGCA 691661 Query 94423 GGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAG 94482 || |||| | ||| ||| | ||| ||||| ||| | || | || | || Sbjct 691660 GGAAAGGGTCGCAAGACTATCAAGGCTCAAAAGCTCTGGTACTCTATTCTTGAGGCTCAA 691601 Query 94483 GTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAG 94542 || || || | || | ||| | | ||| || | |||| ||| |||||| Sbjct 691600 ACCGAAACCGGAAATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAA 691541 Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602 || |||| || || ||||| || ||||||| ||||| |||||||| || | Sbjct 691540 AAGAACCTTGGTACTATTCGCAGCTCCAACTTGTGCACAGAGATCGTCGAGTACTCTGCA 691481 Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGG 94630 || || ||| ||||| |||||| ||| Sbjct 691480 CCAGATGAGGTTGCTTGCTGTAACTTGG 691453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719347343080