Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 1e-20
>seq3
Length=2126074
Score = 114 bits (126), Expect = 1e-20
Identities = 402/628 (64%), Gaps = 0/628 (0%)
Strand=Plus/Minus
Query 94003 TGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCC 94062
||||| | |||||||| | || || || || || ||| | ||| | |||||
Sbjct 692080 TGTGCCATGATCTCAAAGAATGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCT 692021
Query 94063 AGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGG 94122
| ||| | |||||| |||||| ||||| | ||||| || | || || ||||| ||
Sbjct 692020 ACTGGTGCATACATCGCCGGTACTAATGGAAATTCCAATGGTATTGTTCCCATGCTTCGA 691961
Query 94123 GTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTC 94182
|| ||||||||| | || | || || || ||||||||| | | |||| ||||
Sbjct 691960 GTTTTCAACAACACTGCAAGATATGTTGATCAGGGTGGTAACAAACGCCCGGGTGCTTTT 691901
Query 94183 GCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAAC 94242
|| || || || ||||| ||||| || || || | || | || || || ||||||
Sbjct 691900 GCTGTTTACCTTGAGCCATGGCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAGAAC 691841
Query 94243 CACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTT 94302
||||| || || | | || | || |||||||| || | ||| | || || |
Sbjct 691840 CACGGTAAGGAAGAAGTTCGCGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTG 691781
Query 94303 TTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCC 94362
|| ||||| || ||||| || || | |||| |||| | || ||||||||||| ||
Sbjct 691780 TTCATGAAGCGTGTCGAAAAGAATGGAGAATGGACTCTTATGTGCCCCAATGAATGCCCT 691721
Query 94363 GGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAG 94422
|| || | || |||| ||| | ||||| | | | || | |||| ||| |
Sbjct 691720 GGTTTGGCAGATGTTTATGGCGAGGAGTTTGAGGCCCTCTACGAGAGTTATGAAAAGGCA 691661
Query 94423 GGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAG 94482
|| |||| | ||| ||| | ||| ||||| ||| | || | || | ||
Sbjct 691660 GGAAAGGGTCGCAAGACTATCAAGGCTCAAAAGCTCTGGTACTCTATTCTTGAGGCTCAA 691601
Query 94483 GTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAG 94542
|| || || | || | ||| | | ||| || | |||| ||| ||||||
Sbjct 691600 ACCGAAACCGGAAATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAA 691541
Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602
|| |||| || || ||||| || ||||||| ||||| |||||||| || |
Sbjct 691540 AAGAACCTTGGTACTATTCGCAGCTCCAACTTGTGCACAGAGATCGTCGAGTACTCTGCA 691481
Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGG 94630
|| || ||| ||||| |||||| |||
Sbjct 691480 CCAGATGAGGTTGCTTGCTGTAACTTGG 691453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494719347343080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |