Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq34 104 2e-17 >seq34 Length=376069 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | ||||| | || || || || ||||||||||| || || ||| Sbjct 166305 CCACCACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAA 166364 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || | ||| ||||| ||| | |||||||| || ||||| || ||| Sbjct 166365 AGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGA 166424 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || || ||||| || || |||| || | |||||| |||||||| || Sbjct 166425 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACC 166484 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | |||||||| || || || || || || || ||||| Sbjct 166485 TCGAGGGTGATAGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 166531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451999680025080