Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 138 1e-27 seq9 122 1e-22 >seq3 Length=2126074 Score = 138 bits (152), Expect = 1e-27 Identities = 1025/1625 (63%), Gaps = 33/1625 (2%) Strand=Plus/Plus Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623 |||||||| || ||||| | ||| ||||| || | ||||| || | | |||| Sbjct 690576 TAGTACATTCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTG 690635 Query 115624 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 115683 | ||| ||| | |||| | |||||| ||| ||||||||||| || || Sbjct 690636 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCG 690695 Query 115684 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 115741 ||||| || ||||| | || || || ||| | || ||||||| ||||| |||| | Sbjct 690696 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAA 690753 Query 115742 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCA 115801 || ||| || ||| |||| || | ||| ||||| ||||| ||||| | | | Sbjct 690754 GGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCAGCAATGA 690813 Query 115802 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCT 115861 | | | |||||| | | ||||| ||||| || | || || | | ||| Sbjct 690814 TACGGTTCTTCATGTTGTCAGACCAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATG 690873 Query 115862 TATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATGTTGGTCGTGTAT 115920 || ||||| || || || || || || | | || |||||||| | |||||| Sbjct 690874 GGTTAACAACTTGGAATTCTCCGGCCAGAACACGACGTGAG-TAGATGTTTGAAGTGTAT 690932 Query 115921 GGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCC 115980 || ||||| || || ||| ||| | |||||| | ||| || || ||||| ||||| Sbjct 690933 GGTTCAAAACATTCGTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCA 690992 Query 115981 ATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCG 116040 | ||||| |||||| | || | | ||| || ||| | | |||||| || Sbjct 690993 ACAAGAAGAGAGTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCC 691052 Query 116041 TAGT--TGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTG 116098 | | || | | | | ||||||| ||| | ||||| ||| | ||| ||| Sbjct 691053 CACAAATCAGAAG-GAGTGACGC-CCCACATGTCATATTGGAGTTCACCCTTGGAGACTG 691110 Query 116099 GCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGG-AGCTCGCCTCG 116157 | || || | | || || || ||||| ||| || | ||| || | || Sbjct 691111 GAGAGCCTTGGTAAGTTTCGTACGGGCCAAGTTCCTTTGCGATCTCGACAGATGAGGTCA 691170 Query 116158 AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAA 116217 ||| | ||||| || || ||||||||||| | || | |||||| || || Sbjct 691171 AGG-CAGCGTGGTAGATGGTCTCAAAAATCTGGATGTTGAGGTGCTTGGCTTCTGGCGAG 691229 Query 116218 TCAAACGCGAGACGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 116276 || || | ||||| | || ||| |||| || |||||||| ||||| | | || Sbjct 691230 TCGAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCGAT 691288 Query 116277 TGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGAT 116336 || ||||| | | ||| | ||| || | || |||||| | || |||| || Sbjct 691289 AGGTCGATGACGGAAATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAAT 691348 Query 116337 AACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA 116396 | | | || | ||| | ||| || | | || |||||||||| | ||||| | Sbjct 691349 GATCTTGTTCAAGTTTCTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATA 691408 Query 116397 ACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACAC 116453 | | | ||| ||||| |||| | | || || || ||||| |||| ||||| Sbjct 691409 AGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTACAGCA 691465 Query 116454 AGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAAT 116513 || |||||| ||| |||||| | || || || ||||| || || || ||| Sbjct 691466 AGCAACCTCATCTGGTGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAAT 691525 Query 116514 GGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGG 116573 || || | ||||||||| || ||| |||| || ||||| ||||| ||||| | || Sbjct 691526 AGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGG 691585 Query 116574 CGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAG 116632 | || || || ||||| | || ||||||| | ||| | | | | | || | | || Sbjct 691586 ATTTCCGGTTTCGGTTTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTG-ATAG 691644 Query 116633 TGGCGTTGGCTCGCCCCT-CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCC 116691 | | | | | ||| ||| || || | |||||||||||||||||| || || Sbjct 691645 TCTTGC-GACCCTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTCCTCGCCA 691703 Query 116692 ACAGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCACCCTC 116750 | | |||| | || || || || || || || | |||| ||||| ||| || Sbjct 691704 TAAACATCTGCCAAACCAGG-GCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTT 691762 Query 116751 CTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCG 116810 || || ||||||||||| | || || ||||| | || |||||||||| || ||| Sbjct 691763 TTCGACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCGCG 691822 Query 116811 AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA 116870 | ||||||| | || || || || | || | ||| || | | ||| || ||||| Sbjct 691823 AACTTCTTCCTTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCA 691882 Query 116871 CGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCT 116927 || || ||||| || || | | ||| ||| |||| |||| | ||||| || Sbjct 691883 TGGCTCAAGGTAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCT 691942 Query 116928 CGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CC 116986 || || ||| || || |||||||| |||| ||||||| || | ||||| || || Sbjct 691943 TGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACC 692002 Query 116987 CCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCC 117045 ||| || | || | | || | || ||| |||| | ||||||||| || || Sbjct 692003 GGCGATGTATG-CACCAG-TAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCA 692060 Query 117046 CACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCC 117105 ||||||||| || || | | | | | ||||||| ||||| || || | Sbjct 692061 TTCTTTGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCT 692120 Query 117106 TTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGG 117165 || | ||||||||||||| ||| | ||||| ||| ||||| || ||||| Sbjct 692121 TTCATGTCGATGAGGAAGCACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGC 692180 Query 117166 GTTGG 117170 ||||| Sbjct 692181 GTTGG 692185 >seq9 Length=1212739 Score = 122 bits (134), Expect = 1e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||||||||| || ||||||||||||||||| || |||||| || || | ||||||||| Sbjct 165455 GTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACC 165396 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 ||||| || | |||||| || | ||| || |||||||||||||| || || ||| Sbjct 165395 ACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTTCAACAGC 165336 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 127710 ||||| |||| ||||| | ||||||| | ||| |||| ||| || | || Sbjct 165335 GGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCAATCCATTTGACAGC 165276 Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||| | |||||||||| || || || || Sbjct 165275 CCAATCGGCCTTTTTCTTAATGCAAGGAAC 165246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502422312680