Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 1e-27
seq9 122 1e-22
>seq3
Length=2126074
Score = 138 bits (152), Expect = 1e-27
Identities = 1025/1625 (63%), Gaps = 33/1625 (2%)
Strand=Plus/Plus
Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623
|||||||| || ||||| | ||| ||||| || | ||||| || | | ||||
Sbjct 690576 TAGTACATTCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGCATAGATGTGATCTTG 690635
Query 115624 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 115683
| ||| ||| | |||| | |||||| ||| ||||||||||| || ||
Sbjct 690636 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCGATAAATGCACCG 690695
Query 115684 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 115741
||||| || ||||| | || || || ||| | || ||||||| ||||| |||| |
Sbjct 690696 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAA 690753
Query 115742 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCA 115801
|| ||| || ||| |||| || | ||| ||||| ||||| ||||| | | |
Sbjct 690754 GGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATCCACCATCAGCAATGA 690813
Query 115802 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCT 115861
| | | |||||| | | ||||| ||||| || | || || | | |||
Sbjct 690814 TACGGTTCTTCATGTTGTCAGACCAAAGACCCATATCAACAAGGTCTTTGAGGAGCCATG 690873
Query 115862 TATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATGTTGGTCGTGTAT 115920
|| ||||| || || || || || || | | || |||||||| | ||||||
Sbjct 690874 GGTTAACAACTTGGAATTCTCCGGCCAGAACACGACGTGAG-TAGATGTTTGAAGTGTAT 690932
Query 115921 GGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCC 115980
|| ||||| || || ||| ||| | |||||| | ||| || || ||||| |||||
Sbjct 690933 GGTTCAAAACATTCGTTGAAACCGAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCA 690992
Query 115981 ATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCG 116040
| ||||| |||||| | || | | ||| || ||| | | |||||| ||
Sbjct 690993 ACAAGAAGAGAGTTGCGAATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCC 691052
Query 116041 TAGT--TGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTG 116098
| | || | | | | ||||||| ||| | ||||| ||| | ||| |||
Sbjct 691053 CACAAATCAGAAG-GAGTGACGC-CCCACATGTCATATTGGAGTTCACCCTTGGAGACTG 691110
Query 116099 GCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGG-AGCTCGCCTCG 116157
| || || | | || || || ||||| ||| || | ||| || | ||
Sbjct 691111 GAGAGCCTTGGTAAGTTTCGTACGGGCCAAGTTCCTTTGCGATCTCGACAGATGAGGTCA 691170
Query 116158 AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAA 116217
||| | ||||| || || ||||||||||| | || | |||||| || ||
Sbjct 691171 AGG-CAGCGTGGTAGATGGTCTCAAAAATCTGGATGTTGAGGTGCTTGGCTTCTGGCGAG 691229
Query 116218 TCAAACGCGAGACGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 116276
|| || | ||||| | || ||| |||| || |||||||| ||||| | | ||
Sbjct 691230 TCGAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCGAT 691288
Query 116277 TGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGAT 116336
|| ||||| | | ||| | ||| || | || |||||| | || |||| ||
Sbjct 691289 AGGTCGATGACGGAAATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAAT 691348
Query 116337 AACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA 116396
| | | || | ||| | ||| || | | || |||||||||| | ||||| |
Sbjct 691349 GATCTTGTTCAAGTTTCTAACGACCACTTGGACAACCTCGTGAAGCTTTTGGAAATCATA 691408
Query 116397 ACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACAC 116453
| | | ||| ||||| |||| | | || || || ||||| |||| |||||
Sbjct 691409 AGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTACAGCA 691465
Query 116454 AGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAAT 116513
|| |||||| ||| |||||| | || || || ||||| || || || |||
Sbjct 691466 AGCAACCTCATCTGGTGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAAT 691525
Query 116514 GGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGG 116573
|| || | ||||||||| || ||| |||| || ||||| ||||| ||||| | ||
Sbjct 691526 AGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGG 691585
Query 116574 CGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAG 116632
| || || || ||||| | || ||||||| | ||| | | | | | || | | ||
Sbjct 691586 ATTTCCGGTTTCGGTTTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTG-ATAG 691644
Query 116633 TGGCGTTGGCTCGCCCCT-CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCC 116691
| | | | | ||| ||| || || | |||||||||||||||||| || ||
Sbjct 691645 TCTTGC-GACCCTTTCCTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTCCTCGCCA 691703
Query 116692 ACAGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCACCCTC 116750
| | |||| | || || || || || || || | |||| ||||| ||| ||
Sbjct 691704 TAAACATCTGCCAAACCAGG-GCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTT 691762
Query 116751 CTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCG 116810
|| || ||||||||||| | || || ||||| | || |||||||||| || |||
Sbjct 691763 TTCGACACGCTTCATGAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCGCG 691822
Query 116811 AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA 116870
| ||||||| | || || || || | || | ||| || | | ||| || |||||
Sbjct 691823 AACTTCTTCCTTACCGTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCA 691882
Query 116871 CGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCT 116927
|| || ||||| || || | | ||| ||| |||| |||| | ||||| ||
Sbjct 691883 TGGCTCAAGGTAAACAGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCT 691942
Query 116928 CGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CC 116986
|| || ||| || || |||||||| |||| ||||||| || | ||||| || ||
Sbjct 691943 TGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACC 692002
Query 116987 CCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCC 117045
||| || | || | | || | || ||| |||| | ||||||||| || ||
Sbjct 692003 GGCGATGTATG-CACCAG-TAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCA 692060
Query 117046 CACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCC 117105
||||||||| || || | | | | | ||||||| ||||| || || |
Sbjct 692061 TTCTTTGAGATCATGGCACAAATCTTCAAAGTATCGTAGATACCATCAATACTATCCTCT 692120
Query 117106 TTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGG 117165
|| | ||||||||||||| ||| | ||||| ||| ||||| || |||||
Sbjct 692121 TTCATGTCGATGAGGAAGCACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGC 692180
Query 117166 GTTGG 117170
|||||
Sbjct 692181 GTTGG 692185
>seq9
Length=1212739
Score = 122 bits (134), Expect = 1e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
||||||||| || ||||||||||||||||| || |||||| || || | |||||||||
Sbjct 165455 GTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACC 165396
Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650
||||| || | |||||| || | ||| || |||||||||||||| || || |||
Sbjct 165395 ACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGATACCTTCAACAGC 165336
Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 127710
||||| |||| ||||| | ||||||| | ||| |||| ||| || | ||
Sbjct 165335 GGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCAATCCATTTGACAGC 165276
Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGAC 127740
||| | |||||||||| || || || ||
Sbjct 165275 CCAATCGGCCTTTTTCTTAATGCAAGGAAC 165246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613502422312680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |