Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq34 105 2e-17
seq18 98.7 2e-15
>seq34
Length=376069
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485
||| ||||| ||||||||||||| ||||||||| | | || | ||||| || || ||
Sbjct 166328 GTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGTTG 166387
Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545
||||||||||||||| | ||||| ||||| || |||||| || || || |||||
Sbjct 166388 CTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTT 166447
Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
||| || |||| |||||| | | || || || | ||||| || || |||||
Sbjct 166448 GGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGTTTTGCCCGT 166507
Query 199606 GAGAGTTTTCACAAAAATTTG 199626
||| || || || || || ||
Sbjct 166508 GAGGGTCTTGACGAAGATCTG 166528
>seq18
Length=877782
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||| || || | |||||||| |||||||| |||| ||| ||||| | | ||
Sbjct 575584 CGAAGTCTGAGAACCAAATGGAGAGTAGACTCCTTCTGGATGTTATAGTCTGAGAGGGTA 575643
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || || |||||||||||||| || | ||| || ||||| || || ||
Sbjct 575644 CGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGTTGTTGGTCGGGTGGGATGCCC 575703
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| || |||||||| || ||| |||| || || | | ||| || || |
Sbjct 575704 TCTTTGTCTTGAATCTTGGCTTTGACGTTATCGATAGTATCAGAAGATTCAACCTCGAGG 575763
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCAC 199617
||||| ||||| || ||||| || || ||
Sbjct 575764 GTGATGGTCTTTCCGGTGAGGGTCTTAAC 575792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178912189626741
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |