Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq34 105 2e-17 seq18 98.7 2e-15 >seq34 Length=376069 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| ||||||||||||| ||||||||| | | || | ||||| || || || Sbjct 166328 GTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGTTG 166387 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||||||||||||| | ||||| ||||| || |||||| || || || ||||| Sbjct 166388 CTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTT 166447 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || |||| |||||| | | || || || | ||||| || || ||||| Sbjct 166448 GGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGTTTTGCCCGT 166507 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || || Sbjct 166508 GAGGGTCTTGACGAAGATCTG 166528 >seq18 Length=877782 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||| || || | |||||||| |||||||| |||| ||| ||||| | | || Sbjct 575584 CGAAGTCTGAGAACCAAATGGAGAGTAGACTCCTTCTGGATGTTATAGTCTGAGAGGGTA 575643 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || |||||||||||||| || | ||| || ||||| || || || Sbjct 575644 CGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGTTGTTGGTCGGGTGGGATGCCC 575703 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || |||||||| || ||| |||| || || | | ||| || || | Sbjct 575704 TCTTTGTCTTGAATCTTGGCTTTGACGTTATCGATAGTATCAGAAGATTCAACCTCGAGG 575763 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 ||||| ||||| || ||||| || || || Sbjct 575764 GTGATGGTCTTTCCGGTGAGGGTCTTAAC 575792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178912189626741