Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq34 138 1e-27 seq9 113 5e-20 seq18 102 8e-17 seq5 102 8e-17 >seq34 Length=376069 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||||||||| |||||| |||| || ||| | | Sbjct 166531 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACTATCACCCTCGAGGTTGAGTCTTCG 166472 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||||||||| |||||||| Sbjct 166471 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGACCAA 166412 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || || || || || | |||||||| |||||||||| Sbjct 166411 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTTTCCGACTACAAC 166352 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||| | || || || |||||| | ||| Sbjct 166351 ATCCAAAAGGAGTCCACTCTTCACTTGGTGTTACGT 166316 >seq9 Length=1212739 Score = 113 bits (124), Expect = 5e-20 Identities = 191/276 (69%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| ||||||||||| || || |||| ||||| | ||||||||| || ||| || Sbjct 165144 GTATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGGATGTTCTCCATCATGACTTGGAA 165085 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||||| ||| | || ||||| | | || ||||| | | ||| | | ||| | || Sbjct 165084 ACCGTAGAAGAATCGTGCCTCTGCAATTTGAACTTCATTACTGAATCTCGAGACTAAGTT 165025 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| || || ||| || ||||| || || || ||||| |||||| | || Sbjct 165024 CTCGTTGACAATTCCATCGGATGCTGCGAAGAATGCGAGAACGTGAGAGATGAAGTAACG 164965 Query 133347 CTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||||| ||| || | | | ||| ||| | ||||| |||| ||| | ||| || Sbjct 164964 CTCGTCGTCATTGAGCCTGTTATTCCAATCGTGAAGATCCTTTGACAAGTCAATCTCTTC 164905 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || ||||| || ||||||||||| Sbjct 164904 TGCGGTCCAGAAGGAGGCCTCTGCCTTTTTGTACAT 164869 >seq18 Length=877782 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || || || ||||||||| | || |||||| ||| ||||| | | | | |||| Sbjct 576064 ACTGGAAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACTATTGACAATGTCAAAGCC 576005 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||| ||||| |||| |||||||| | |||| ||| ||||| Sbjct 576004 AAGATCCAAGACAAGGAGGGGATTCCTCCCGATCAACAGCGTTTGATTTTCGCAGGCAAG 575945 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 || || || || | ||||||||| ||||||||||| || ||||| | || || ||| Sbjct 575944 CAACTTGAAGATGGTCGCACCCTCTCAGACTACAACATTCAGAAGGAGTCCACACTTCAT 575885 Query 38448 TTGGTGCTGCG 38458 | || || || Sbjct 575884 CTCGTCCTCCG 575874 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGC 38309 ||| |||| || || ||||| || || ||||||||| |||| || || | | || | Sbjct 575798 ATAGTCGTTAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTTGAATCTTCTGATACT 575739 Query 38310 GTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368 | | |||| | |||| || || | ||||||||||| || || |||||||||| || Sbjct 575738 ATCGATAACG-TCAAAGCCAAGATTCAAGACAAAGAGGGCATCCCACCCGACCAACAACG 575680 Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428 | |||| ||| || || || || || || | || |||||| ||||| |||||||| Sbjct 575679 TTTGATTTTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCAGACTATAACATCCA 575620 Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||| | || || |||||||| || Sbjct 575619 GAAGGAGTCTACTCTCCATTTGGTTCT 575593 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || ||||| | || || ||| | | Sbjct 575576 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACAATCACTTTAGAGGTTGAGTCGTCG 575517 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || || | ||||||||||| || || | |||||| Sbjct 575516 GATACCATCGACAATGTGAAGGCTAAGATTCAAGACAAAGAGGGTATCCCACCTGACCAA 575457 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || || || || || || | || || || |||||||||| Sbjct 575456 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAAC 575397 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||| | || | |||||||| || ||| Sbjct 575396 ATCCAAAAAGAATCAACTTTACATTTGGTCCTTCGT 575361 >seq5 Length=1928780 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| || | |||| | Sbjct 1275303 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACTATC 1275244 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | |||| | || |||| ||||| |||||||||||| |||| ||||| || | Sbjct 1275243 GACAATGTTAAGGCTAAGATCCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTG 1275184 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || || || || |||| || || || || ||||||||||||||| Sbjct 1275183 ATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTTTCAGATTACAACATCCAAAAG 1275124 Query 38433 G 38433 | Sbjct 1275123 G 1275123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168904904320