Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq5 104 9e-17 seq18 102 3e-16 >seq5 Length=1928780 Score = 104 bits (114), Expect = 9e-17 Identities = 140/194 (72%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 391046 TATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATC 391105 |||||| |||| ||||| || || || || || || || || || ||||| || || || Sbjct 1275315 TATAAT-AATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTC 1275257 Query 391106 ATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGA 391165 ||||| | || || | |||| || || ||||| ||||| |||||||| || || Sbjct 1275256 CTCTGACACTATCGACAATGTTAAGGCTAAGATCCAAGACAAGGAGGGAATTCCCCCCGA 1275197 Query 391166 TCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTA 391225 |||||||||||| || ||| | || || |||||||| || ||| | ||| | | ||||| Sbjct 1275196 TCAACAACGTTTGATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTTTCAGATTA 1275137 Query 391226 TAATATTGATAAGG 391239 || || | |||| Sbjct 1275136 CAACATCCAAAAGG 1275123 >seq18 Length=877782 Score = 102 bits (112), Expect = 3e-16 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 391072 TGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAAC 391131 ||||||| || || || || ||||| || || || || | ||||| | | ||| Sbjct 576066 TGACTGGAAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACTATTGACAATGTCAAAG 576007 Query 391132 AAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGA 391191 || || ||||| ||||| || |||||||| |||||||| ||||| |||||| |||| | Sbjct 576006 CCAAGATCCAAGACAAGGAGGGGATTCCTCCCGATCAACAGCGTTTGATTTTCGCAGGCA 575947 Query 391192 AACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTC 391251 | |||||||||||||| | || | | || || || ||| | ||||| | ||||||| Sbjct 575946 AGCAACTTGAAGATGGTCGCACCCTCTCAGACTACAACATTCAGAAGGAGTCCACACTTC 575887 Query 391252 A 391252 | Sbjct 575886 A 575886 Score = 96.9 bits (106), Expect = 1e-14 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| || ||||||| || ||||| || | || || ||||| || Sbjct 575348 ATGCAAATCTTTGTTAAGACCTTGACTGGAAAGACTATCACATTAGAGGTAGAATCTTCG 575289 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || || ||||| |||||||| || ||||| ||||||||| Sbjct 575288 GATACTATTGATAATGTCAAGGCTAAGATTCAGGATAAGGAGGGCATTCCACCTGATCAA 575229 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || ||| | || || || | || || || |||||| | |||||| || Sbjct 575228 CAGCGATTGATCTTCGCTGGAAAGCAGTTGGAGGACGGCAGAACTCTTTTGGATTACAAC 575169 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 575168 ATTCAAAAGGA 575158 Score = 96.9 bits (106), Expect = 1e-14 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119 ||||||| || || || || || || || || || || |||||||| ||||||| || | Sbjct 575794 TCGTTAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTTGAATCTTCTGATACTATCG 575735 Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179 | | ||| || |||||||| || || || || || || || ||||||||||| | Sbjct 575734 ATAACGTCAAAGCCAAGATTCAAGACAAAGAGGGCATCCCACCCGACCAACAACGTTTGA 575675 Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239 ||||| | || || |||||||| ||||| | || | | || ||||| || | |||| Sbjct 575674 TTTTCGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCAGACTATAACATCCAGAAGG 575615 Query 391240 ATGCAACACTTCACTTAGTATTAAGACT 391267 | | || || || || || | ||||| Sbjct 575614 AGTCTACTCTCCATTTGGTTCTCAGACT 575587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975702629445284