Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3 185 1e-41 seq9 136 5e-27 >seq3 Length=2126074 Score = 185 bits (204), Expect = 1e-41 Identities = 1101/1735 (63%), Gaps = 55/1735 (3%) Strand=Plus/Minus Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680 ||| ||||||| || || | ||||| || || || ||||| || || | | || ||| Sbjct 692284 ATGATCATGCGTGTTGCCGTGGGTATTCACGGTGATGATATCGAAAGTGCTATCGAAACA 692225 Query 111681 TACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739 ||| || |||||| ||| || | || || | ||||| ||||| || || Sbjct 692224 TACAACTTGATGTCAAACAAGTACTTT-ACACATGCTTCCCCAACGCTCTTTTCTGCGGG 692166 Query 111740 TACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAA 111799 ||| ||| | | ||| | || || ||||| || | | || |||||| || | Sbjct 692165 TACTCCACAAGCACAACTTTCGTCGTGCTTCCTCATCGACATGAAAGAGGATAGTATTGA 692106 Query 111800 TGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGG 111859 ||| || |||| ||| | | |||||| ||||||||| || |||||||| || Sbjct 692105 TGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGAATGCCGGTGGTATTGG 692046 Query 111860 GATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAAT 111918 | |||| || || | || | | || | || ||||| ||||| | | Sbjct 692045 TCTCAACATTCACAGAATCCGTGCTA-CTGGTGCATACATCGCCGGTACTAATGGAAATT 691987 Query 111919 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAG 111978 | |||||||| |||| |||||||| || || ||| ||| || | ||||| | || | Sbjct 691986 CCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCAAGATATGTTGATCAGG 691927 Query 111979 CTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCA 112035 ||| ||| ||| || | || || || |||||||||||||| || ||| | Sbjct 691926 GTGGTAACAAACGCCCGGGTGCTTTTGCTGTTTACCTTGAGCCATGGCATGCCGATGTTT 691867 Query 112036 TGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCT 112095 | ||||| ||||| | || ||||| ||| | || || | || |||||||||| Sbjct 691866 TCGAGTTTCTTGATCTACGCAAGAACCACGGTAAGGAAGAAGTTCGCGCACGCGATCTCT 691807 Query 112096 TCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGT 112155 ||| || | |||||||| ||| | ||||||||| | || || ||| ||| | ||| Sbjct 691806 TCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTCGAAAAGAATGGAGAATGGA 691747 Query 112156 CTCTCTTTTG-TCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAA 112214 |||| | || ||| || || || ||| | | |||| || ||||||||||| Sbjct 691746 CTCTTATGTGCCCCAATGAATGC-CCTGGTTTGGCAGATGTTTATGGCGAGGAGTTTGAG 691688 Query 112215 GCCCTCTACACAAAGTACG---AGGAAGAAA---GTCGGGCGACTGCGACGGTGCCAGCT 112268 ||||||||| | || | ||| || || |||| |||| | | ||| Sbjct 691687 GCCCTCTACGAGAGTTATGAAAAGGCAGGAAAGGGTCGCAAGACTATCAAG------GCT 691634 Query 112269 GCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTT 112328 | | ||| | ||||||| || |||||||||| || || | || | |||||| Sbjct 691633 CAAAAGCTCTGGTACTCTATTCTTGAGGCTCAAACCGAAACCGGAAATCCTTTCATGCTT 691574 Query 112329 TACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCC 112388 |||||||| || || ||| | ||||| || |||||||| | ||| || || ||| Sbjct 691573 TACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTTGGTACTATTCGCAGCTCC 691514 Query 112389 AACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTC 112448 ||| | || ||||| ||| | || | | | ||||||| ||| |||||| | Sbjct 691513 AACTTGTGCACAGAGATCGTCGAGTACTCTGCACCAGATGAGGTTGCTTGCTGTAACTTG 691454 Query 112449 GCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACATTTGATTATGAAAA 112507 || ||||| ||||| |||| | | | | || | | || | ||||| |||| Sbjct 691453 GCTTCAATTGCTCT-ACCAACTTTCGTCAACATGAATGAGGGAACTTATGATTTCCAAAA 691395 Query 112508 ACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTT 112567 || ||||| ||| || ||| | |||| | |||| | ||||||| || | Sbjct 691394 GCTTCACGAGGTTGTCCAAGTGGTCGTTAGAAACTTGAACAAGATCATTGATATCAACTA 691335 Query 112568 TTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGT 112627 ||| || || | || | | ||| | | || || || || | | | ||||| Sbjct 691334 TTATCCAGTACAAGAAGCCAGAAGGAGCAATTTCCGTCATCGACCTATCGCTGTTGGTGT 691275 Query 112628 CCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTCCGACGAAGC 112684 |||||||| || |||| ||| | |||| ||| | |||| || || ||||| Sbjct 691274 TCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTC---CATTCGACTCGCCAGAAGC 691218 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GGCGAGTT 112743 ||| | |||| | || |||||||| || || ||||| || ||||| | | Sbjct 691217 CAAGCACCTCAACATCCAGATTTTTGAGACCATCTACCACGCTGC-CTTGACCTCATCTG 691159 Query 112744 CGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAG 112803 ||| | ||| ||| ||| || || ||||| | | || ||||||| || |||| Sbjct 691158 TCGAGATCGCAAAGGAACTTGGCCCGTACGAAACTTACCAAGGCTCTCCAGTCTC-CAAG 691100 Query 112804 GG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACG 112860 || | || |||| ||| ||||||| || | || || | | || |||||| Sbjct 691099 GGTGAACTCCAATATGACATGTGGG-GCGTCACTCC-TTCTGATTTGTGGGATTGGGACT 691042 Query 112861 CTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGC 112920 || | ||| || ||||||| | | || |||| ||| |||| | | ||||| |||| Sbjct 691041 CTTTGAAGCAATCCATCAAGCAACACGGAATTCGCAACTCTCTTCTTGTTGCACCTATGC 690982 Query 112921 CAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGA 112980 | || || ||| |||||||| | ||| || ||||| |||||||| ||||| | | Sbjct 690981 CTACTGCTAGCACTTCACAAATCCTCGGTTTCAACGAATGTTTTGAACCATACACTTCAA 690922 Query 112981 ACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT--CTCG 113037 ||||||| || | | | || || ||||| || |||| ||| ||| ||| Sbjct 690921 ACATCTA-CTCACGTCGTGTTCTGGCCGGAGAATTCCAAGTTGTTAAC--CCATGGCTCC 690865 Query 113038 TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCTCA-TGGTG 113093 | | ||||| || || ||||| ||||| | | |||||| | | ||| || || Sbjct 690864 TCAAAGACCTTGTTGATATGGGTCTTTGGTCTGACAACATGAAGAACCGTATCATTGCTG 690805 Query 113094 AAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTAC 113153 | ||||| || |||||||| || | ||||||| ||| || ||| | ||| Sbjct 690804 A----TGGTGGATCTATTCAAAACATCCCCAACATTCCAGCTGACATCAAGGCCCTTTAC 690749 Query 113154 CGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTC 113211 || |||||||||| || | ||| | | || | ||||| || ||||| ||| Sbjct 690748 AAGACTGTTTGGGAAATTTCTCAACGAACAA--TTGTTCAAATGGCTGCTGATCGCGGTG 690691 Query 113212 GCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGC 113271 || || |||||| |||| ||||| | |||| | ||| || ||| |||| Sbjct 690690 CATTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAATGGGCAAGA 690631 Query 113272 TCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 113326 || | ||||||||| | | ||||| |||| | || || || ||||| || Sbjct 690630 TCACATCTATGCACTTTGCTGGATGGAAATTGGGTTTGAAGACCGGAATGTACTA 690576 >seq9 Length=1212739 Score = 136 bits (150), Expect = 5e-27 Identities = 159/212 (75%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 102169 |||||| || ||| | || || || ||||||||| | || ||| |||| ||| Sbjct 165245 AGTTCCTTGCATTAAGAAAAAGGCCGATTGGGCTGTCAAATGGATTGAAGATAAGAGCTC 165304 Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229 | |||||||| | || ||| | ||||| || |||||| ||||||||||||||||| | Sbjct 165305 TACCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGAT- 165363 Query 102230 CTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 ||| ||| | || | |||||||| ||||| ||||||||| | || ||| |||||||| Sbjct 165364 CTTTTGCATCAATCTTCTGGCTCAAAAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCA 165423 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||| || ||||| ||||| || || |||||| Sbjct 165424 ACGAACTCATCTCCCGTGATGAAGGTCTCCAC 165455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620737565968560