Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq3 185 1e-41
seq9 136 5e-27
>seq3
Length=2126074
Score = 185 bits (204), Expect = 1e-41
Identities = 1101/1735 (63%), Gaps = 55/1735 (3%)
Strand=Plus/Minus
Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680
||| ||||||| || || | ||||| || || || ||||| || || | | || |||
Sbjct 692284 ATGATCATGCGTGTTGCCGTGGGTATTCACGGTGATGATATCGAAAGTGCTATCGAAACA 692225
Query 111681 TACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739
||| || |||||| ||| || | || || | ||||| ||||| || ||
Sbjct 692224 TACAACTTGATGTCAAACAAGTACTTT-ACACATGCTTCCCCAACGCTCTTTTCTGCGGG 692166
Query 111740 TACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAA 111799
||| ||| | | ||| | || || ||||| || | | || |||||| || |
Sbjct 692165 TACTCCACAAGCACAACTTTCGTCGTGCTTCCTCATCGACATGAAAGAGGATAGTATTGA 692106
Query 111800 TGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGG 111859
||| || |||| ||| | | |||||| ||||||||| || |||||||| ||
Sbjct 692105 TGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGAATGCCGGTGGTATTGG 692046
Query 111860 GATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAAT 111918
| |||| || || | || | | || | || ||||| ||||| | |
Sbjct 692045 TCTCAACATTCACAGAATCCGTGCTA-CTGGTGCATACATCGCCGGTACTAATGGAAATT 691987
Query 111919 CAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAG 111978
| |||||||| |||| |||||||| || || ||| ||| || | ||||| | || |
Sbjct 691986 CCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACAACACTGCAAGATATGTTGATCAGG 691927
Query 111979 CTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCA 112035
||| ||| ||| || | || || || |||||||||||||| || ||| |
Sbjct 691926 GTGGTAACAAACGCCCGGGTGCTTTTGCTGTTTACCTTGAGCCATGGCATGCCGATGTTT 691867
Query 112036 TGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCT 112095
| ||||| ||||| | || ||||| ||| | || || | || ||||||||||
Sbjct 691866 TCGAGTTTCTTGATCTACGCAAGAACCACGGTAAGGAAGAAGTTCGCGCACGCGATCTCT 691807
Query 112096 TCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGT 112155
||| || | |||||||| ||| | ||||||||| | || || ||| ||| | |||
Sbjct 691806 TCTATGCCTTGTGGATTCCTGATTTGTTCATGAAGCGTGTCGAAAAGAATGGAGAATGGA 691747
Query 112156 CTCTCTTTTG-TCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAA 112214
|||| | || ||| || || || ||| | | |||| || |||||||||||
Sbjct 691746 CTCTTATGTGCCCCAATGAATGC-CCTGGTTTGGCAGATGTTTATGGCGAGGAGTTTGAG 691688
Query 112215 GCCCTCTACACAAAGTACG---AGGAAGAAA---GTCGGGCGACTGCGACGGTGCCAGCT 112268
||||||||| | || | ||| || || |||| |||| | | |||
Sbjct 691687 GCCCTCTACGAGAGTTATGAAAAGGCAGGAAAGGGTCGCAAGACTATCAAG------GCT 691634
Query 112269 GCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTT 112328
| | ||| | ||||||| || |||||||||| || || | || | ||||||
Sbjct 691633 CAAAAGCTCTGGTACTCTATTCTTGAGGCTCAAACCGAAACCGGAAATCCTTTCATGCTT 691574
Query 112329 TACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCC 112388
|||||||| || || ||| | ||||| || |||||||| | ||| || || |||
Sbjct 691573 TACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTTGGTACTATTCGCAGCTCC 691514
Query 112389 AACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTC 112448
||| | || ||||| ||| | || | | | ||||||| ||| |||||| |
Sbjct 691513 AACTTGTGCACAGAGATCGTCGAGTACTCTGCACCAGATGAGGTTGCTTGCTGTAACTTG 691454
Query 112449 GCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACATTTGATTATGAAAA 112507
|| ||||| ||||| |||| | | | | || | | || | ||||| ||||
Sbjct 691453 GCTTCAATTGCTCT-ACCAACTTTCGTCAACATGAATGAGGGAACTTATGATTTCCAAAA 691395
Query 112508 ACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTT 112567
|| ||||| ||| || ||| | |||| | |||| | ||||||| || |
Sbjct 691394 GCTTCACGAGGTTGTCCAAGTGGTCGTTAGAAACTTGAACAAGATCATTGATATCAACTA 691335
Query 112568 TTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGT 112627
||| || || | || | | ||| | | || || || || | | | |||||
Sbjct 691334 TTATCCAGTACAAGAAGCCAGAAGGAGCAATTTCCGTCATCGACCTATCGCTGTTGGTGT 691275
Query 112628 CCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTCCGACGAAGC 112684
|||||||| || |||| ||| | |||| ||| | |||| || || |||||
Sbjct 691274 TCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTC---CATTCGACTCGCCAGAAGC 691218
Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GGCGAGTT 112743
||| | |||| | || |||||||| || || ||||| || ||||| | |
Sbjct 691217 CAAGCACCTCAACATCCAGATTTTTGAGACCATCTACCACGCTGC-CTTGACCTCATCTG 691159
Query 112744 CGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAG 112803
||| | ||| ||| ||| || || ||||| | | || ||||||| || ||||
Sbjct 691158 TCGAGATCGCAAAGGAACTTGGCCCGTACGAAACTTACCAAGGCTCTCCAGTCTC-CAAG 691100
Query 112804 GG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGACG 112860
|| | || |||| ||| ||||||| || | || || | | || ||||||
Sbjct 691099 GGTGAACTCCAATATGACATGTGGG-GCGTCACTCC-TTCTGATTTGTGGGATTGGGACT 691042
Query 112861 CTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGC 112920
|| | ||| || ||||||| | | || |||| ||| |||| | | ||||| ||||
Sbjct 691041 CTTTGAAGCAATCCATCAAGCAACACGGAATTCGCAACTCTCTTCTTGTTGCACCTATGC 690982
Query 112921 CAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGA 112980
| || || ||| |||||||| | ||| || ||||| |||||||| ||||| | |
Sbjct 690981 CTACTGCTAGCACTTCACAAATCCTCGGTTTCAACGAATGTTTTGAACCATACACTTCAA 690922
Query 112981 ACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT--CTCG 113037
||||||| || | | | || || ||||| || |||| ||| ||| |||
Sbjct 690921 ACATCTA-CTCACGTCGTGTTCTGGCCGGAGAATTCCAAGTTGTTAAC--CCATGGCTCC 690865
Query 113038 TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCTCA-TGGTG 113093
| | ||||| || || ||||| ||||| | | |||||| | | ||| || ||
Sbjct 690864 TCAAAGACCTTGTTGATATGGGTCTTTGGTCTGACAACATGAAGAACCGTATCATTGCTG 690805
Query 113094 AAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTAC 113153
| ||||| || |||||||| || | ||||||| ||| || ||| | |||
Sbjct 690804 A----TGGTGGATCTATTCAAAACATCCCCAACATTCCAGCTGACATCAAGGCCCTTTAC 690749
Query 113154 CGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTC 113211
|| |||||||||| || | ||| | | || | ||||| || ||||| |||
Sbjct 690748 AAGACTGTTTGGGAAATTTCTCAACGAACAA--TTGTTCAAATGGCTGCTGATCGCGGTG 690691
Query 113212 GCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGC 113271
|| || |||||| |||| ||||| | |||| | ||| || ||| ||||
Sbjct 690690 CATTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAATGGGCAAGA 690631
Query 113272 TCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 113326
|| | ||||||||| | | ||||| |||| | || || || ||||| ||
Sbjct 690630 TCACATCTATGCACTTTGCTGGATGGAAATTGGGTTTGAAGACCGGAATGTACTA 690576
>seq9
Length=1212739
Score = 136 bits (150), Expect = 5e-27
Identities = 159/212 (75%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 102169
|||||| || ||| | || || || ||||||||| | || ||| |||| |||
Sbjct 165245 AGTTCCTTGCATTAAGAAAAAGGCCGATTGGGCTGTCAAATGGATTGAAGATAAGAGCTC 165304
Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229
| |||||||| | || ||| | ||||| || |||||| ||||||||||||||||| |
Sbjct 165305 TACCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGAT- 165363
Query 102230 CTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288
||| ||| | || | |||||||| ||||| ||||||||| | || ||| ||||||||
Sbjct 165364 CTTTTGCATCAATCTTCTGGCTCAAAAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCA 165423
Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320
|||| || ||||| ||||| || || ||||||
Sbjct 165424 ACGAACTCATCTCCCGTGATGAAGGTCTCCAC 165455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620737565968560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |