Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq3 217 2e-51
>seq3
Length=2126074
Score = 217 bits (240), Expect = 2e-51
Identities = 1107/1729 (64%), Gaps = 57/1729 (3%)
Strand=Plus/Plus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559
|||||| || ||||| |||||||| ||| ||| |||||||| ||||| | | ||
Sbjct 690662 GTTCATTGATTGAGATTGATCGATAAATGCACCGCGATCAGCAGCCATTTGAACAATTGT 690721
Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619
||| ||||||||| ||||||||||| | |||||| ||| | |||||||
Sbjct 690722 TCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATGTTGGG 690781
Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTTCGACC 109675
||||||||||||||| |||||| ||| || ||| | | |||||| | | ||||
Sbjct 690782 GATGTTTTGAATAGATCCACCA----TCAGCAATGATACGGTTCTTCATGTTGTCAGACC 690837
Query 109676 AGAGACCGACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCACC 109733
| ||||| | | || || | | || ||| ||| || || ||||| ||
Sbjct 690838 AAAGACCCATATCAACAAGGTCTTTGAGGAGCCATGG--GTTAACAACTTGGAATTCTCC 690895
Query 109734 AGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCC 109793
|| || || || ||||||||| | ||||| ||||| ||||| || ||| ||
Sbjct 690896 GGCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACATTCGTTGAAACC 690955
Query 109794 TAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853
|||||||||| |||| ||| || ||||| || || | |||||| ||| || | ||
Sbjct 690956 GAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGAGTTGCGAATTCC 691015
Query 109854 CTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAA-ATTTAGTCT 109912
| ||| | | || | ||||||||| | || | | | | |||
Sbjct 691016 GTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATC----CCACAAATCAGAAGGAGTGA 691071
Query 109913 CACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCT 109972
| || |||||| || ||| ||| |||||| | | ||||| || | | || | |
Sbjct 691072 CGCC---CCACATGTCATATTGGAGTTCACCCTTGGAGACTGGAGAGCCTTGGTAAGTTT 691128
Query 109973 CGTACGACCCCTCAACCTCGGCCAACTCG---GATGAAGCCTCTAGTGCCGCATGATACA 110029
|||||| || ||| || | |||| ||||| | || || || || || || |
Sbjct 691129 CGTACGGGCCAAGTTCCTTTGCGATCTCGACAGATGAGG--TCAAG-GCAGCGTGGTAGA 691185
Query 110030 TAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCAC 110089
| ||||||||||| || || | | | | ||| ||||||| ||||||| |
Sbjct 691186 TGGTCTCAAAAATCTGGATGTTGAGGTGCTTGGCTTCTGGCGAGTCGAATGGAAGACGA- 691244
Query 110090 AAAG--AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCAT 110147
| || || ||| |||| || ||||| |||||||| | | | || || ||||| |
Sbjct 691245 AGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAA 691303
Query 110148 GTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGA-GAT 110206
|| | || || || ||| || ||| ||||| || |||| | || | | |
Sbjct 691304 ATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTT 691363
Query 110207 TCTT-CGTCACAGTCTTCGTGATT-TCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTC 110264
||| || | || ||| | | || || || || | | |||| | ||| | |
Sbjct 691364 TCTAACGAC-CA--CTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATT 691420
Query 110265 CTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTT 110324
| | ||||| | | || |||||||| || || | || || || | ||| |||
Sbjct 691421 CATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGG 691480
Query 110325 GTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTT 110384
| | ||| || | || || || ||||||||||| || ||| ||| | ||||||
Sbjct 691481 TGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTT 691540
Query 110385 CTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGT 110444
|| || || |||||||||||| || || |||||| | || | || ||||| ||
Sbjct 691541 TTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGT 691600
Query 110445 CTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGT--TGCGTTAGCGAGA 110502
|| | || ||||| | | ||| | | || || ||| |||| | |
Sbjct 691601 TTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGATAGTCTTGCG--ACCCTTT 691658
Query 110503 CCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGA 110562
||| ||| || || | ||| | | ||||||| |||| || || ||||| | | |
Sbjct 691659 CCTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAA 691718
Query 110563 CCCTTCGCCTTG-TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCAT 110621
|| || || | ||| || | || | ||| | |||| || || || | ||||||
Sbjct 691719 CCAGG-GCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCTTCAT 691777
Query 110622 GAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACC 110681
||||| ||||||||||||| || |||| || || || ||| | ||||| | |||
Sbjct 691778 GAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACC 691837
Query 110682 TTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGAC 110741
||||| |||||| || | ||| || | | ||| | |||||||| || || || ||
Sbjct 691838 GTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAAC 691897
Query 110742 AGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798
||| | | ||| || ||| |||| | |||||| | ||| ||| |||||
Sbjct 691898 AGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTTGAA 691957
Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACC-CCTAATTCTGGACT 110857
|| | ||||| |||| ||| |||| ||| | ||||| ||||| | | | || ||
Sbjct 691958 AACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGCAC- 692016
Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917
| | ||||| || ||| || | | |||||||||||| || ||| || |
Sbjct 692017 CAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGG 692076
Query 110918 CAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976
||| | ||| | | ||| | || ||||||||||| ||| | || || | || ||
Sbjct 692077 CACAAATCT-TCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGG 692135
Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036
||||| || || | || | | || || |||||| ||||| || || | |||||
Sbjct 692136 AAGCACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATG- 692194
Query 111037 ATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTAC 111094
|| | || |||| |||||| ||||||||| |||| || | ||| | ||
Sbjct 692195 -TGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCAC 692253
Query 111095 CGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTTTCGATTAGCTTT-CC 111152
|||||||||| | |||||| ||||||| ||| | |||||| || | || | |||| ||
Sbjct 692254 CGTGAATACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTCCG--CAACTTTACC 692311
Query 111153 ATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201
||||| ||| ||| || ||| |||||||||| || ||||||
Sbjct 692312 ATCAAGACGTAAAAGATATGATCGCTCAAGGGTCTTGAACCCGAAGTAT 692360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588971413349400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |