Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 217 2e-51 >seq3 Length=2126074 Score = 217 bits (240), Expect = 2e-51 Identities = 1107/1729 (64%), Gaps = 57/1729 (3%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 |||||| || ||||| |||||||| ||| ||| |||||||| ||||| | | || Sbjct 690662 GTTCATTGATTGAGATTGATCGATAAATGCACCGCGATCAGCAGCCATTTGAACAATTGT 690721 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 ||| ||||||||| ||||||||||| | |||||| ||| | ||||||| Sbjct 690722 TCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATGTTGGG 690781 Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTTCGACC 109675 ||||||||||||||| |||||| ||| || ||| | | |||||| | | |||| Sbjct 690782 GATGTTTTGAATAGATCCACCA----TCAGCAATGATACGGTTCTTCATGTTGTCAGACC 690837 Query 109676 AGAGACCGACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCACC 109733 | ||||| | | || || | | || ||| ||| || || ||||| || Sbjct 690838 AAAGACCCATATCAACAAGGTCTTTGAGGAGCCATGG--GTTAACAACTTGGAATTCTCC 690895 Query 109734 AGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCC 109793 || || || || ||||||||| | ||||| ||||| ||||| || ||| || Sbjct 690896 GGCCAGAACACGACGTGAGTAGATGTTTGAAGTGTATGGTTCAAAACATTCGTTGAAACC 690955 Query 109794 TAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 |||||||||| |||| ||| || ||||| || || | |||||| ||| || | || Sbjct 690956 GAGGATTTGTGAAGTGCTAGCAGTAGGCATAGGTGCAACAAGAAGAGAGTTGCGAATTCC 691015 Query 109854 CTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAA-ATTTAGTCT 109912 | ||| | | || | ||||||||| | || | | | | ||| Sbjct 691016 GTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATC----CCACAAATCAGAAGGAGTGA 691071 Query 109913 CACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCT 109972 | || |||||| || ||| ||| |||||| | | ||||| || | | || | | Sbjct 691072 CGCC---CCACATGTCATATTGGAGTTCACCCTTGGAGACTGGAGAGCCTTGGTAAGTTT 691128 Query 109973 CGTACGACCCCTCAACCTCGGCCAACTCG---GATGAAGCCTCTAGTGCCGCATGATACA 110029 |||||| || ||| || | |||| ||||| | || || || || || || | Sbjct 691129 CGTACGGGCCAAGTTCCTTTGCGATCTCGACAGATGAGG--TCAAG-GCAGCGTGGTAGA 691185 Query 110030 TAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCAC 110089 | ||||||||||| || || | | | | ||| ||||||| ||||||| | Sbjct 691186 TGGTCTCAAAAATCTGGATGTTGAGGTGCTTGGCTTCTGGCGAGTCGAATGGAAGACGA- 691244 Query 110090 AAAG--AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCAT 110147 | || || ||| |||| || ||||| |||||||| | | | || || ||||| | Sbjct 691245 AGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAA 691303 Query 110148 GTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGA-GAT 110206 || | || || || ||| || ||| ||||| || |||| | || | | | Sbjct 691304 ATTGCTCCTTCTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTT 691363 Query 110207 TCTT-CGTCACAGTCTTCGTGATT-TCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTC 110264 ||| || | || ||| | | || || || || | | |||| | ||| | | Sbjct 691364 TCTAACGAC-CA--CTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATT 691420 Query 110265 CTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTT 110324 | | ||||| | | || |||||||| || || | || || || | ||| ||| Sbjct 691421 CATGTTGACGAAAGTTGGTAGAGCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGG 691480 Query 110325 GTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTT 110384 | | ||| || | || || || ||||||||||| || ||| ||| | |||||| Sbjct 691481 TGCAGAGTACTCGACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTT 691540 Query 110385 CTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGT 110444 || || || |||||||||||| || || |||||| | || | || ||||| || Sbjct 691541 TTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGT 691600 Query 110445 CTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGT--TGCGTTAGCGAGA 110502 || | || ||||| | | ||| | | || || ||| |||| | | Sbjct 691601 TTGAGCCTCAAGAATAGAGTACCAGAGCTTTTGAGCCTTGATAGTCTTGCG--ACCCTTT 691658 Query 110503 CCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGA 110562 ||| ||| || || | ||| | | ||||||| |||| || || ||||| | | | Sbjct 691659 CCTGCCTTTTCATAACTCTCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAA 691718 Query 110563 CCCTTCGCCTTG-TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCAT 110621 || || || | ||| || | || | ||| | |||| || || || | |||||| Sbjct 691719 CCAGG-GCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCTTCAT 691777 Query 110622 GAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACC 110681 ||||| ||||||||||||| || |||| || || || ||| | ||||| | ||| Sbjct 691778 GAACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACC 691837 Query 110682 TTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGAC 110741 ||||| |||||| || | ||| || | | ||| | |||||||| || || || || Sbjct 691838 GTGGTTCTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAAC 691897 Query 110742 AGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 ||| | | ||| || ||| |||| | |||||| | ||| ||| ||||| Sbjct 691898 AGCAAAAGCACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTTGAA 691957 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACC-CCTAATTCTGGACT 110857 || | ||||| |||| ||| |||| ||| | ||||| ||||| | | | || || Sbjct 691958 AACTCGAAGCATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGCAC- 692016 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 | | ||||| || ||| || | | |||||||||||| || ||| || | Sbjct 692017 CAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGG 692076 Query 110918 CAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976 ||| | ||| | | ||| | || ||||||||||| ||| | || || | || || Sbjct 692077 CACAAATCT-TCAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGG 692135 Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036 ||||| || || | || | | || || |||||| ||||| || || | ||||| Sbjct 692136 AAGCACGACGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATG- 692194 Query 111037 ATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTAC 111094 || | || |||| |||||| ||||||||| |||| || | ||| | || Sbjct 692195 -TGTAAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCAC 692253 Query 111095 CGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTTTCGATTAGCTTT-CC 111152 |||||||||| | |||||| ||||||| ||| | |||||| || | || | |||| || Sbjct 692254 CGTGAATACCCACGGCAACACGCATGATCATTTGTTGAGGACGCTCCG--CAACTTTACC 692311 Query 111153 ATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 ||||| ||| ||| || ||| |||||||||| || |||||| Sbjct 692312 ATCAAGACGTAAAAGATATGATCGCTCAAGGGTCTTGAACCCGAAGTAT 692360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971413349400