Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 235 6e-57 seq2 95.1 1e-14 seq9 93.3 5e-14 >seq3 Length=2126074 Score = 235 bits (260), Expect = 6e-57 Identities = 1174/1830 (64%), Gaps = 65/1830 (4%) Strand=Plus/Plus Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640 ||| ||| || | ||||||||| |||||||| | || |||||| | | ||| Sbjct 690561 GCCATAGTACGTAAATAGTACATTCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGC 690620 Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700 ||||| | || |||| ||| || ||| | |||| || ||||| |||| || Sbjct 690621 ATAGATGTGATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGA 690680 Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCC 105758 || || || ||| || | || ||||| | || | | ||| | || |||||| Sbjct 690681 TCGATAAATGCACCGCGATCAGCAGCCATTTGAACAA--TTGTTCGTTGAGAAATTTCCC 690738 Query 105759 ACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAAC 105818 | || || ||| || |||||| ||| |||| || | | ||| |||||||| || | Sbjct 690739 AAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATC 690798 Query 105819 CCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGAT 105878 | || | | || | | |||||| | | ||||||||||| || | || | Sbjct 690799 CACCATCAGCAATGATACGGTTCTTCATGTTGTCAGACCAAAGACCCATATCAACAAGGT 690858 Query 105879 CATTGACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTC-TCAGAT 105935 | |||| ||| ||| ||| |||| || ||||| || || | | | || | Sbjct 690859 CTTTGAGGAGCCATGG--GTTAACAACTTGGAATTCTCCGGCCAGAACACGACGTGAG-T 690915 Query 105936 AGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGG 105995 ||||||| | ||||| |||||||| ||||| || ||| | |||||||| ||| | Sbjct 690916 AGATGTTTGAAGTGTATGGTTCAAAACATTCGTTGAAACCGAGGATTTGTGAAGTGCTAG 690975 Query 105996 CTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCT 106055 | || ||||| ||||| | | |||| ||| |||| || | || ||||||| || || Sbjct 690976 CAGTAGGCATAGGTGCAACAAGAAGAGAGTTGCGAATTCCGTGTTGCTTGATGGATTGCT 691035 Query 106056 TGAGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAG 106113 | | | ||||| || | | || || | || ||||||| ||| |||| || Sbjct 691036 TCAAAGAGTCCCAATCCCACAAATCAGAA-GGAGTGACGC-CCCACATGTCATATTGGAG 691093 Query 106114 CAC-CCCTTGG-GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC 106171 | ||||||| ||| ||||| || | | || || || | || | | | || Sbjct 691094 TTCACCCTTGGAGACT--GGAGAGCCTTGGTAAGTTTCGTACGGGCCAAGTTCCTTTGCG 691151 Query 106172 AATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 106230 | || |||| | || ||| | ||||| || ||||| ||||| || | || | Sbjct 691152 ATCTCGACAGATGAGGTCAAGGCA-GCGTGGTAGATGGTCTCAAAAATCTGGATGTTGAG 691210 Query 106231 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAGA 106288 | ||||||||| || || |||| | || | | | || ||| |||| || ||| Sbjct 691211 GTGCTTGGCTTCTGGCGAGTCGAATG-GAAGACGAAGAGCCAAGAAAG-CATCAGCAAGA 691268 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 106348 ||||||||||| | | | ||||||| || || | ||| | ||| || | || Sbjct 691269 CCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTCCTTCTGGCTTCTTGTACT 691328 Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT-TC 106407 |||||| | || | ||||||| ||| | ||| | || | ||| | | || Sbjct 691329 GGATAATAGTTGATATCAATGATCTTGTTCAAGTTTCTAACGACCA-CTTGGACAACCTC 691387 Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGGGC 106464 ||||| |||| ||||| |||| | ||| ||||| |||| | |||| || || Sbjct 691388 GTGAAGCTTTTGGAAATCATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGC 691444 Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524 ||||| ||||| || || ||| |||||| | | |||||| | || ||||| Sbjct 691445 AATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATCTCTGT 691504 Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584 ||||||||||| || ||| || || | ||||||||||| ||||| |||||||| || Sbjct 691505 GCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGC 691564 Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||| ||||| |||||| | || | || || || || || | || ||||| | | ||| Sbjct 691565 ATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGTTTGAGCCTCAAGAATAGAGTACCA 691624 Query 106645 CA-CATCGGCGGCTGG-TACAATGGCGTTGGCCCGTCCCT-CCGCCTCGTACTTTGTGTA 106701 | | | | | || | || | ||| ||| | ||| || || || | ||| Sbjct 691625 GAGCTTTTGAGCCTTGATAGTCTTGCGA---CCCTTTCCTGCCTTTTCATAACTCTCGTA 691681 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGA-CAGA 106760 |||||| ||||||||||| || | || | | ||| || || || ||| || | Sbjct 691682 GAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAACCAGG-GCATTCATTGGGGCACA 691740 Query 106761 AAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820 ||||| ||||| ||| || || || ||||||||||| | || |||||||||| || Sbjct 691741 TAAGAGTCCATTCTCCATTCTTTTCGACACGCTTCATGAACAAATCAGGAATCCACAAGG 691800 Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880 | |||||||| | ||| | ||||| | ||| ||||| |||| ||||| | Sbjct 691801 CATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACCGTGGTTCTTGCGTAGATCAAGAA 691860 Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---AC 106937 |||| | | ||| || |||||||||||||| || || || | || ||| || Sbjct 691861 ACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCACCCGGGCGTTTGT 691920 Query 106938 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 106997 ||| | |||| ||||| | || ||| ||| || || |||||||| |||| ||||| Sbjct 691921 TACCACCCTGATCAACATATCTTGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATAC 691980 Query 106998 CATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA--- 107054 ||| || | ||||| || || | ||| ||| || | | || ||| Sbjct 691981 CATTGGAATTTCCATTAGTACC-------GGCGATGTAT--GCACCAGTAGCACGGATTC 692031 Query 107055 TGTGCAT------CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108 |||| || |||||||| || || ||||||||| ||||| | | | || Sbjct 692032 TGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAG 692091 Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168 | | |||||||| | || ||||| || || |||| |||||||| || | | Sbjct 692092 TATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAGCACGACGAAAGTT 692151 Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGG 107227 | | | ||| ||||| ||| ||||| ||||| | || || | || ||| | | Sbjct 692152 GTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGT-AAAGTACTTGTTT 692210 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287 |||||| || |||||| || | || || || || || ||||| || || | ||| Sbjct 692211 GACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCGTGAATACCCACGGCA 692270 Query 107288 ACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA- 107346 |||||||| | ||| | ||| || ||| | | ||||| || ||| |||||| Sbjct 692271 ACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACCATCAAGACGTAAAAGATAT 692330 Query 107347 GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 | || ||||||||| |||| || ||||| Sbjct 692331 GATC-GCTCAAGGGTCTTGAACCCGAAGTA 692359 >seq2 Length=2344949 Score = 95.1 bits (104), Expect = 1e-14 Identities = 171/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| || | || ||||| ||||||||||| |||||| ||| | |||||| | Sbjct 1542139 ATGGCCGCATCGCCCCACGTTCCGGTCTCGCCTCTAAGCATATGATTGATACTGGTGCCG 1542198 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| ||||| | || |||| ||| |||| | ||| | ||||| || ||||| || | Sbjct 1542199 GTGTAATTGACGCTGATTATAGGGGTCAAGTAAGAGTACTCCTCTTTAACCACGGCGAAA 1542258 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGCTGTGAAA 155224 | || | |||||| ||| | || ||||| || ||||| | | | ||| | | | | Sbjct 1542259 AGGATTATGAGGTGAAGGAGGGCGATCGTATTGCACAGTTGATTTTGGAGAGGATTTATA 1542318 Query 155225 CACCCGATGTGGAGGAAATTGGTGTTCTTGAAGAGACAGAGAGAGGTGCGGGTGGATTTG 155284 |||| || || |||| | ||| | ||||||| | ||| |||| ||| || || | Sbjct 1542319 CACCTGAGGTCACGGAAGTCTTGGTTTTGGAAGAGAGTGTGAGGGGTGAGGGGGGTTTCG 1542378 Query 155285 GATCTACTGG 155294 || |||||| Sbjct 1542379 GAAGTACTGG 1542388 >seq9 Length=1212739 Score = 93.3 bits (102), Expect = 5e-14 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||||||||| ||||| ||||| || ||||| || |||||| || || | ||||||||| Sbjct 165455 GTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACC 165396 Query 117345 CCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403 ||||| || | ||| | || | ||| || || || |||||||||||||| || ||| Sbjct 165395 ACGCTTTTTGAGCCAGAAGATTGATGCAAAA-GATCCAGAGAAGAAGATACCTTCAACAG 165337 Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAAGG-AGCGAGACTTTGTGTCAAACCATTTCATT 117462 || || |||| || || | || |||| || | ||| |||| |||||| | Sbjct 165336 CGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAG-CTCTTATCTTCAATCCATTTGACA 165278 Query 117463 GCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 ||||| | ||||| |||| ||| || || || Sbjct 165277 GCCCAATCGGCCTTTTTCTTAATGCAAGGAAC 165246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976205524520