Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq3 235 6e-57
seq2 95.1 1e-14
seq9 93.3 5e-14
>seq3
Length=2126074
Score = 235 bits (260), Expect = 6e-57
Identities = 1174/1830 (64%), Gaps = 65/1830 (4%)
Strand=Plus/Plus
Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640
||| ||| || | ||||||||| |||||||| | || |||||| | | |||
Sbjct 690561 GCCATAGTACGTAAATAGTACATTCCGGTCTTCAAACCCAATTTCCATCCAGCAAAGTGC 690620
Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700
||||| | || |||| ||| || ||| | |||| || ||||| |||| ||
Sbjct 690621 ATAGATGTGATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGA 690680
Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCC 105758
|| || || ||| || | || ||||| | || | | ||| | || ||||||
Sbjct 690681 TCGATAAATGCACCGCGATCAGCAGCCATTTGAACAA--TTGTTCGTTGAGAAATTTCCC 690738
Query 105759 ACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAAC 105818
| || || ||| || |||||| ||| |||| || | | ||| |||||||| || |
Sbjct 690739 AAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATGTTGGGGATGTTTTGAATAGATC 690798
Query 105819 CCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGAT 105878
| || | | || | | |||||| | | ||||||||||| || | || |
Sbjct 690799 CACCATCAGCAATGATACGGTTCTTCATGTTGTCAGACCAAAGACCCATATCAACAAGGT 690858
Query 105879 CATTGACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTC-TCAGAT 105935
| |||| ||| ||| ||| |||| || ||||| || || | | | || |
Sbjct 690859 CTTTGAGGAGCCATGG--GTTAACAACTTGGAATTCTCCGGCCAGAACACGACGTGAG-T 690915
Query 105936 AGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGG 105995
||||||| | ||||| |||||||| ||||| || ||| | |||||||| ||| |
Sbjct 690916 AGATGTTTGAAGTGTATGGTTCAAAACATTCGTTGAAACCGAGGATTTGTGAAGTGCTAG 690975
Query 105996 CTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCT 106055
| || ||||| ||||| | | |||| ||| |||| || | || ||||||| || ||
Sbjct 690976 CAGTAGGCATAGGTGCAACAAGAAGAGAGTTGCGAATTCCGTGTTGCTTGATGGATTGCT 691035
Query 106056 TGAGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAG 106113
| | | ||||| || | | || || | || ||||||| ||| |||| ||
Sbjct 691036 TCAAAGAGTCCCAATCCCACAAATCAGAA-GGAGTGACGC-CCCACATGTCATATTGGAG 691093
Query 106114 CAC-CCCTTGG-GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC 106171
| ||||||| ||| ||||| || | | || || || | || | | | ||
Sbjct 691094 TTCACCCTTGGAGACT--GGAGAGCCTTGGTAAGTTTCGTACGGGCCAAGTTCCTTTGCG 691151
Query 106172 AATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 106230
| || |||| | || ||| | ||||| || ||||| ||||| || | || |
Sbjct 691152 ATCTCGACAGATGAGGTCAAGGCA-GCGTGGTAGATGGTCTCAAAAATCTGGATGTTGAG 691210
Query 106231 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAGA 106288
| ||||||||| || || |||| | || | | | || ||| |||| || |||
Sbjct 691211 GTGCTTGGCTTCTGGCGAGTCGAATG-GAAGACGAAGAGCCAAGAAAG-CATCAGCAAGA 691268
Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 106348
||||||||||| | | | ||||||| || || | ||| | ||| || | ||
Sbjct 691269 CCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTCCTTCTGGCTTCTTGTACT 691328
Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT-TC 106407
|||||| | || | ||||||| ||| | ||| | || | ||| | | ||
Sbjct 691329 GGATAATAGTTGATATCAATGATCTTGTTCAAGTTTCTAACGACCA-CTTGGACAACCTC 691387
Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGGGC 106464
||||| |||| ||||| |||| | ||| ||||| |||| | |||| || ||
Sbjct 691388 GTGAAGCTTTTGGAAATCATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGC 691444
Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524
||||| ||||| || || ||| |||||| | | |||||| | || |||||
Sbjct 691445 AATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTACTCGACGATCTCTGT 691504
Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584
||||||||||| || ||| || || | ||||||||||| ||||| |||||||| ||
Sbjct 691505 GCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGC 691564
Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644
||| ||||| |||||| | || | || || || || || | || ||||| | | |||
Sbjct 691565 ATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGTTTGAGCCTCAAGAATAGAGTACCA 691624
Query 106645 CA-CATCGGCGGCTGG-TACAATGGCGTTGGCCCGTCCCT-CCGCCTCGTACTTTGTGTA 106701
| | | | | || | || | ||| ||| | ||| || || || | |||
Sbjct 691625 GAGCTTTTGAGCCTTGATAGTCTTGCGA---CCCTTTCCTGCCTTTTCATAACTCTCGTA 691681
Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGA-CAGA 106760
|||||| ||||||||||| || | || | | ||| || || || ||| || |
Sbjct 691682 GAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAACCAGG-GCATTCATTGGGGCACA 691740
Query 106761 AAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820
||||| ||||| ||| || || || ||||||||||| | || |||||||||| ||
Sbjct 691741 TAAGAGTCCATTCTCCATTCTTTTCGACACGCTTCATGAACAAATCAGGAATCCACAAGG 691800
Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880
| |||||||| | ||| | ||||| | ||| ||||| |||| ||||| |
Sbjct 691801 CATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACCGTGGTTCTTGCGTAGATCAAGAA 691860
Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---AC 106937
|||| | | ||| || |||||||||||||| || || || | || ||| ||
Sbjct 691861 ACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCACCCGGGCGTTTGT 691920
Query 106938 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 106997
||| | |||| ||||| | || ||| ||| || || |||||||| |||| |||||
Sbjct 691921 TACCACCCTGATCAACATATCTTGCAGTGTTGTTGAAAACTCGAAGCATGGGAACAATAC 691980
Query 106998 CATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA--- 107054
||| || | ||||| || || | ||| ||| || | | || |||
Sbjct 691981 CATTGGAATTTCCATTAGTACC-------GGCGATGTAT--GCACCAGTAGCACGGATTC 692031
Query 107055 TGTGCAT------CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108
|||| || |||||||| || || ||||||||| ||||| | | | ||
Sbjct 692032 TGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAG 692091
Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168
| | |||||||| | || ||||| || || |||| |||||||| || | |
Sbjct 692092 TATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAGCACGACGAAAGTT 692151
Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGG 107227
| | | ||| ||||| ||| ||||| ||||| | || || | || ||| | |
Sbjct 692152 GTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGT-AAAGTACTTGTTT 692210
Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287
|||||| || |||||| || | || || || || || ||||| || || | |||
Sbjct 692211 GACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCGTGAATACCCACGGCA 692270
Query 107288 ACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA- 107346
|||||||| | ||| | ||| || ||| | | ||||| || ||| ||||||
Sbjct 692271 ACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACCATCAAGACGTAAAAGATAT 692330
Query 107347 GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
| || ||||||||| |||| || |||||
Sbjct 692331 GATC-GCTCAAGGGTCTTGAACCCGAAGTA 692359
>seq2
Length=2344949
Score = 95.1 bits (104), Expect = 1e-14
Identities = 171/250 (68%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104
|||| || | || ||||| ||||||||||| |||||| ||| | |||||| |
Sbjct 1542139 ATGGCCGCATCGCCCCACGTTCCGGTCTCGCCTCTAAGCATATGATTGATACTGGTGCCG 1542198
Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164
|||| ||||| | || |||| ||| |||| | ||| | ||||| || ||||| || |
Sbjct 1542199 GTGTAATTGACGCTGATTATAGGGGTCAAGTAAGAGTACTCCTCTTTAACCACGGCGAAA 1542258
Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGCTGTGAAA 155224
| || | |||||| ||| | || ||||| || ||||| | | | ||| | | | |
Sbjct 1542259 AGGATTATGAGGTGAAGGAGGGCGATCGTATTGCACAGTTGATTTTGGAGAGGATTTATA 1542318
Query 155225 CACCCGATGTGGAGGAAATTGGTGTTCTTGAAGAGACAGAGAGAGGTGCGGGTGGATTTG 155284
|||| || || |||| | ||| | ||||||| | ||| |||| ||| || || |
Sbjct 1542319 CACCTGAGGTCACGGAAGTCTTGGTTTTGGAAGAGAGTGTGAGGGGTGAGGGGGGTTTCG 1542378
Query 155285 GATCTACTGG 155294
|| ||||||
Sbjct 1542379 GAAGTACTGG 1542388
>seq9
Length=1212739
Score = 93.3 bits (102), Expect = 5e-14
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
||||||||| ||||| ||||| || ||||| || |||||| || || | |||||||||
Sbjct 165455 GTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCAGCCATGAGACC 165396
Query 117345 CCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403
||||| || | ||| | || | ||| || || || |||||||||||||| || |||
Sbjct 165395 ACGCTTTTTGAGCCAGAAGATTGATGCAAAA-GATCCAGAGAAGAAGATACCTTCAACAG 165337
Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAAGG-AGCGAGACTTTGTGTCAAACCATTTCATT 117462
|| || |||| || || | || |||| || | ||| |||| |||||| |
Sbjct 165336 CGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAG-CTCTTATCTTCAATCCATTTGACA 165278
Query 117463 GCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494
||||| | ||||| |||| ||| || || ||
Sbjct 165277 GCCCAATCGGCCTTTTTCTTAATGCAAGGAAC 165246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589976205524520
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