Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq9 161 1e-34
>seq9
Length=1212739
Score = 161 bits (178), Expect = 1e-34
Identities = 275/392 (70%), Gaps = 9/392 (2%)
Strand=Plus/Minus
Query 159394 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATG 159453
|| ||||| |||| || || ||||| || || ||||||||||| | |||||||| |||
Sbjct 192528 TGCTTGATTCCAGTTTCTGCTCATGGTACCAACCCTGCATCAGCTGCTATGGCAGGTATG 192469
Query 159454 AAAGTTGTAGGTGTCAAGTGTGA--TGATGA-TGGCAACATAGACATCAAAGATCTAGAG 159510
||||| || || ||||| | | | |||||| | ||||| ||||| ||
Sbjct 192468 CGTGTTGTCACAGTGAAATGTGACATCAAGTCTGGCAATCTTGACATGGCTGATCTTAAG 192409
Query 159511 AAGAAAGCAATCATGAATACATTT--GAACTGTCATGTATTATGATTACATATCCATCTA 159568
||||| | | |||| | ||||| | ||| ||||| ||||| ||| ||
Sbjct 192408 GAGAAATG--TGAAAAATATAGCGAGGAACTTGGAGCTATCATGATCACATACCCAAGTA 192351
Query 159569 CACATGGTGTATTTGAAACA-AACATCAGACAGATATGTAAGATTGTTCATGAGAATGGT 159627
|| ||||||||||||| | || | || | | |||| | ||||||||| | |||||
Sbjct 192350 CATTTGGTGTATTTGAACCGGAAGTTAAGGCTGC-ATGTGATATTGTTCATCAACATGGT 192292
Query 159628 GGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGT 159687
||||| ||||| | || ||||| ||| | ||||| || | || | ||| ||
Sbjct 192291 GGTCAAGTATACATGGACGGTGCCAATATGAATGCTCAAATTGGATTGTGTTCACCTGGT 192232
Query 159688 GACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGA 159747
|| |||||| |||||||||||||| ||| | || ||||||||||| ||||| |||||
Sbjct 192231 GAGATTGGTGCCGATGTATGTCATCTTAACCTTCACAAGACATTCTGCATTCCTCATGGT 192172
Query 159748 GGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
||||| || || || || ||||| ||||||||
Sbjct 192171 GGTGGTGGACCAGGTGTTGGTCCAATTGGTGT 192140
Score = 120 bits (132), Expect = 4e-22
Identities = 195/281 (69%), Gaps = 0/281 (0%)
Strand=Plus/Minus
Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481
||||| ||| | || | | ||| | ||||| |||| | || || || ||||| |||
Sbjct 193566 GACATCGCTTTCGGAAATGCTCAACGTTTTGGAGTTCCATTCGGTTATGGTGGTCCCCAT 193507
Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541
||||| ||||| || || |||||||||||||| | || || | | | |||
Sbjct 193506 GCTGCTTTCTTCGCTGTTGGCGATAAGTATAAGAGAAAAACCCCAGGACGTCTCATTGGT 193447
Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601
|| |||||| ||| |||||||| ||||| || |||| |||||||| |||
Sbjct 193446 GTATCGAAAGATAGGCTAGGGGATAAAGCAATGAGATTGGCTTTACAAACTAGAGAACAG 193387
Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661
||||| | ||||| || || || ||||| | ||||| || |||||| || |||| ||
Sbjct 193386 CATATTCGCAGAGAAAAGGCTACTAGTAATGTGTGCACTGCTCAAGCATTGTTGGCCAAC 193327
Query 158662 ATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACT 158702
||| || |||||||||| || || || |||| |||||
Sbjct 193326 ATGAGTGCATTCTATGCAGTTTACCACGGCCCAGAAGGACT 193286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588046620551280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |