Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq9 161 1e-34 >seq9 Length=1212739 Score = 161 bits (178), Expect = 1e-34 Identities = 275/392 (70%), Gaps = 9/392 (2%) Strand=Plus/Minus Query 159394 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATG 159453 || ||||| |||| || || ||||| || || ||||||||||| | |||||||| ||| Sbjct 192528 TGCTTGATTCCAGTTTCTGCTCATGGTACCAACCCTGCATCAGCTGCTATGGCAGGTATG 192469 Query 159454 AAAGTTGTAGGTGTCAAGTGTGA--TGATGA-TGGCAACATAGACATCAAAGATCTAGAG 159510 ||||| || || ||||| | | | |||||| | ||||| ||||| || Sbjct 192468 CGTGTTGTCACAGTGAAATGTGACATCAAGTCTGGCAATCTTGACATGGCTGATCTTAAG 192409 Query 159511 AAGAAAGCAATCATGAATACATTT--GAACTGTCATGTATTATGATTACATATCCATCTA 159568 ||||| | | |||| | ||||| | ||| ||||| ||||| ||| || Sbjct 192408 GAGAAATG--TGAAAAATATAGCGAGGAACTTGGAGCTATCATGATCACATACCCAAGTA 192351 Query 159569 CACATGGTGTATTTGAAACA-AACATCAGACAGATATGTAAGATTGTTCATGAGAATGGT 159627 || ||||||||||||| | || | || | | |||| | ||||||||| | ||||| Sbjct 192350 CATTTGGTGTATTTGAACCGGAAGTTAAGGCTGC-ATGTGATATTGTTCATCAACATGGT 192292 Query 159628 GGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGT 159687 ||||| ||||| | || ||||| ||| | ||||| || | || | ||| || Sbjct 192291 GGTCAAGTATACATGGACGGTGCCAATATGAATGCTCAAATTGGATTGTGTTCACCTGGT 192232 Query 159688 GACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGA 159747 || |||||| |||||||||||||| ||| | || ||||||||||| ||||| ||||| Sbjct 192231 GAGATTGGTGCCGATGTATGTCATCTTAACCTTCACAAGACATTCTGCATTCCTCATGGT 192172 Query 159748 GGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||| || || || || ||||| |||||||| Sbjct 192171 GGTGGTGGACCAGGTGTTGGTCCAATTGGTGT 192140 Score = 120 bits (132), Expect = 4e-22 Identities = 195/281 (69%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 158422 GACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCAT 158481 ||||| ||| | || | | ||| | ||||| |||| | || || || ||||| ||| Sbjct 193566 GACATCGCTTTCGGAAATGCTCAACGTTTTGGAGTTCCATTCGGTTATGGTGGTCCCCAT 193507 Query 158482 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 158541 ||||| ||||| || || |||||||||||||| | || || | | | ||| Sbjct 193506 GCTGCTTTCTTCGCTGTTGGCGATAAGTATAAGAGAAAAACCCCAGGACGTCTCATTGGT 193447 Query 158542 CAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 158601 || |||||| ||| |||||||| ||||| || |||| |||||||| ||| Sbjct 193446 GTATCGAAAGATAGGCTAGGGGATAAAGCAATGAGATTGGCTTTACAAACTAGAGAACAG 193387 Query 158602 CATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 ||||| | ||||| || || || ||||| | ||||| || |||||| || |||| || Sbjct 193386 CATATTCGCAGAGAAAAGGCTACTAGTAATGTGTGCACTGCTCAAGCATTGTTGGCCAAC 193327 Query 158662 ATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACT 158702 ||| || |||||||||| || || || |||| ||||| Sbjct 193326 ATGAGTGCATTCTATGCAGTTTACCACGGCCCAGAAGGACT 193286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588046620551280