Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq34 149 1e-30
seq18 141 2e-28
>seq34
Length=376069
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988
|| || | ||||||||||||||| ||||| || ||||| |||| ||| || | |||||
Sbjct 166320 AACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCC 166379
Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||||| ||||| || |||||||| | ||| |||||||| || ||||| || || ||||||
Sbjct 166380 TCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCT 166439
Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108
|| || || |||||| || || |||||||||||| || || || ||||| | ||
Sbjct 166440 TGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGTT 166499
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | || || ||||| | |||||
Sbjct 166500 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 166531
>seq18
Length=877782
Score = 141 bits (156), Expect = 2e-28
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||| || |||||||| || ||||| |||| |||||||| ||||| || || ||||||||
Sbjct 575379 AGTTGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGCTTACC 575438
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|| |||||||| ||||||||||| || || || || |||||||||||||| || |||
Sbjct 575439 AGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCCTCTTTGTCTTGAATCTTAGCCTT 575498
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
|| || || ||||| ||||| || || || | || | |||||||| || | |||
Sbjct 575499 CACATTGTCGATGGTATCCGACGACTCAACCTCTAAAGTGATTGTCTTTCCGGTGAGAGT 575558
Query 195123 TTTTACGAACACTTGCAT 195140
|| ||||| | |||||
Sbjct 575559 CTTGACGAAGATCTGCAT 575576
Score = 118 bits (130), Expect = 2e-21
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||| | ||| | || ||||| ||||| || || || || || || | || || |
Sbjct 575587 AGTCTGAGAACCAAATGGAGAGTAGACTCCTTCTGGATGTTATAGTCTGAGAGGGTACGA 575646
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| || || ||||| || ||||| || | ||||||||||| || || ||||| |||
Sbjct 575647 CCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGTTGTTGGTCGGGTGGGATGCCCTCT 575706
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||||||||| || |||||||| || || || || ||| ||| || || |||||
Sbjct 575707 TTGTCTTGAATCTTGGCTTTGACGTTATCGATAGTATCAGAAGATTCAACCTCGAGGGTG 575766
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGA 195130
| |||||||| || | || || ||||
Sbjct 575767 ATGGTCTTTCCGGTGAGGGTCTTAACGA 575794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109472743909841
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |