Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq34 149 1e-30 seq18 141 2e-28 >seq34 Length=376069 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | ||||||||||||||| ||||| || ||||| |||| ||| || | ||||| Sbjct 166320 AACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCC 166379 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||| ||||| || |||||||| | ||| |||||||| || ||||| || || |||||| Sbjct 166380 TCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCT 166439 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || || |||||| || || |||||||||||| || || || ||||| | || Sbjct 166440 TGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATAGTT 166499 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || ||||| | ||||| Sbjct 166500 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 166531 >seq18 Length=877782 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || |||||||| || ||||| |||| |||||||| ||||| || || |||||||| Sbjct 575379 AGTTGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCAAGTTGCTTACC 575438 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 || |||||||| ||||||||||| || || || || |||||||||||||| || ||| Sbjct 575439 AGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCCTCTTTGTCTTGAATCTTAGCCTT 575498 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || || ||||| ||||| || || || | || | |||||||| || | ||| Sbjct 575499 CACATTGTCGATGGTATCCGACGACTCAACCTCTAAAGTGATTGTCTTTCCGGTGAGAGT 575558 Query 195123 TTTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 575559 CTTGACGAAGATCTGCAT 575576 Score = 118 bits (130), Expect = 2e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | ||| | || ||||| ||||| || || || || || || | || || | Sbjct 575587 AGTCTGAGAACCAAATGGAGAGTAGACTCCTTCTGGATGTTATAGTCTGAGAGGGTACGA 575646 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || || ||||| || ||||| || | ||||||||||| || || ||||| ||| Sbjct 575647 CCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGTTGTTGGTCGGGTGGGATGCCCTCT 575706 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||||||||| || |||||||| || || || || ||| ||| || || ||||| Sbjct 575707 TTGTCTTGAATCTTGGCTTTGACGTTATCGATAGTATCAGAAGATTCAACCTCGAGGGTG 575766 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 | |||||||| || | || || |||| Sbjct 575767 ATGGTCTTTCCGGTGAGGGTCTTAACGA 575794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109472743909841