Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq3 168 8e-37
>seq3
Length=2126074
Score = 168 bits (186), Expect = 8e-37
Identities = 491/748 (66%), Gaps = 16/748 (2%)
Strand=Plus/Plus
Query 47991 TTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATG 48050
||||| ||||| || ||||||||||| ||||| |||| ||||| | |||| ||||
Sbjct 691554 TTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGTTTGAGCCTCAAGA 691613
Query 48051 ATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATG----TTC 48106
||||| | ||| | | |||||| ||| ||| || | || || |||
Sbjct 691614 ATAGAGTACCAGAGCTTTTGAGCCTTGATAG----TCTTGCGACCCTTTCCTGCCTTTTC 691669
Query 48107 GTA--TTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACAT 48164
|| | | ||| | | |||||| || || ||||| |||| | || ||||| |||
Sbjct 691670 ATAACTCTCGTAGAGGGC--CTCAAACTCCTCGCCATAAACATCTGCCAAACCAGGGCAT 691727
Query 48165 TCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCT 48224
||||| || ||||| | | ||| || ||| |||| || | |||| || | |||
Sbjct 691728 TCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCGACACGCTTCATGAACAAATCA 691787
Query 48225 GGTATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCT 48283
|| ||||| | || ||| || | ||| | | | | |||||| || || ||| |
Sbjct 691788 GGAATCCACAAGGC-ATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACCGTGGTTCTT 691846
Query 48284 TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTAC 48343
|| |||||||| || | | ||| ||||||||||| || | || | || | |
Sbjct 691847 GCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGC 691906
Query 48344 ACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAA 48403
||| || ||||| ||||| || ||||| | |||||| ||||| ||||| |||||| |
Sbjct 691907 ACCCGGGCGTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTTGAAAACTCGAAG 691966
Query 48404 CATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCT 48463
||| || ||||||||||| || | ||||| || || | || || ||| |||| |
Sbjct 691967 CATGGGAACAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGCACCAGTAGCACG 692026
Query 48464 TATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTT 48523
|| | ||| | ||| |||||||| || | || || || | ||||| ||
Sbjct 692027 GATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTT 692086
Query 48524 AAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGA 48583
| ||||| || || || || |||||||| ||| |||| | | || || || ||
Sbjct 692087 CAAAGTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAGCACGACGA 692146
Query 48584 CATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTT 48643
| ||| | || ||| || | | ||| | ||||| || ||||| |||| | ||
Sbjct 692147 AAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGTAAAGTACTT 692206
Query 48644 CTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTA 48702
| ||| | ||| || |||||||| ||| || || ||||| || | || ||||| |
Sbjct 692207 GTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCG-TGAATACCCA 692265
Query 48703 TAGATACACGCATTAACATATATTGAGG 48730
| |||||||| | ||| | ||||||
Sbjct 692266 CGGCAACACGCATGATCATTTGTTGAGG 692293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562104422577720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |