Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq9 116 4e-21 >seq9 Length=1212739 Score = 116 bits (128), Expect = 4e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 ||||| ||||| || | ||||||||| | || | ||| || || ||||| | | Sbjct 165469 CATGCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGT 165410 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 || | ||| | ||| | ||||| | ||| || |||| ||||||||||||||| ||||| Sbjct 165409 CCAGCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAG 165350 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAA 37355 ||||||||||| || || ||||| || |||||| | | || || || || | ||| | Sbjct 165349 ATACCTTCAACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCA 165290 Query 37356 ATCCAtttttttGTCCAATCTGCCTTT 37382 |||||||| | |||||| |||||| Sbjct 165289 ATCCATTTGACAGCCCAATCGGCCTTT 165263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592312187332920