Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq18 120 2e-22
seq5 93.3 3e-14
>seq18
Length=877782
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| | || ||||||||||| || ||||| |||| | ||||| | |||| ||
Sbjct 575368 ACCAAATGTAAAGTTGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCGGCCATCCTCA 575427
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||||||| ||||| || | ||| ||||| || || || || || ||||| ||||||
Sbjct 575428 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCCTCTTTGTCTTGA 575487
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | || || |||| || || || | ||||| || ||
Sbjct 575488 ATCTTAGCCTTCACATTGTCGATGGTATCCGACGACTCAACCTCTAAAGTGATTGTCTTT 575547
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| | ||| || || || ||||||||
Sbjct 575548 CCGGTGAGAGTCTTGACGAAGATCTGCAT 575576
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 101278 TTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAA 101337
||| ||||| || |||||||| | ||||||| | || ||||| ||||| || || ||
Sbjct 575157 TTCCTTTTGAATGTTGTAATCCAAAAGAGTTCTGCCGTCCTCCAACTGCTTTCCAGCGAA 575216
Query 101338 TATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAAT 101397
||||| ||||||||||| || |||||||| || ||||| ||||| || || ||| |
Sbjct 575217 GATCAATCGCTGTTGATCAGGTGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATT 575276
Query 101398 TTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTAC 101457
|| | ||| || || | ||| || || | |||| || || || || || || || ||
Sbjct 575277 ATCAATAGTATCCGAAGATTCTACCTCTAATGTGATAGTCTTTCCAGTCAAGGTCTTAAC 575336
Query 101458 AAATATCTGCAT 101469
||| || |||||
Sbjct 575337 AAAGATTTGCAT 575348
Score = 95.1 bits (104), Expect = 1e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
|||||| || || || || || || ||||| || | || || | |||| || | |||
Sbjct 575885 ATGAAGTGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGGGTGCGACCATCTTCAAGTTG 575944
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| ||||| || |||||||||||||||||||| ||||| || || || ||||| || ||
Sbjct 575945 CTTGCCTGCGAAAATCAAACGCTGTTGATCGGGAGGAATCCCCTCCTTGTCTTGGATCTT 576004
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| ||| | || | |||||| | || || ||||| |||| || || || ||
Sbjct 576005 GGCTTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTTCCAGT 576064
>seq5
Length=1928780
Score = 93.3 bits (102), Expect = 3e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341
||||| || |||||||| | | ||| | | || || | |||||| || || || |||
Sbjct 1275125 TTTTGGATGTTGTAATCTGAAAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 1275184
Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401
||||| ||||||||||| ||||| || || || ||||| || || || ||| | ||
Sbjct 1275185 AAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTGTCG 1275244
Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
| ||||||||| | || || ||||| |||| || ||||| ||
Sbjct 1275245 ATAGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 1275288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396275391132411
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |