Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq9 176 8e-39 >seq9 Length=1212739 Score = 176 bits (194), Expect = 8e-39 Identities = 356/520 (68%), Gaps = 19/520 (4%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || ||||| ||||| |||||||| ||||| || |||| |||||||||||| Sbjct 165757 TGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTCTCC 165698 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG-CCCATCTGTTCCAGCAG 47958 |||||| ||| ||||||| | || || || |||| |||| ||||||| Sbjct 165697 ATGAAGTCGAATGGGTTGGCAGACTTGTAGACTT-TGTCGTTACCCAAAGCAACCAGCAG 165639 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 |||| |||||| |||| ||||||| |||||| || ||||||||||| || || Sbjct 165638 ACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAAAGAGA 165579 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 || | ||||| || | || || | || || | |||||||| | | | Sbjct 165578 GCAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACAT- 165520 Query 48079 CTTAACGCGGGACTCTGAGGGTTTGT-TGCGCAGGTGCTTGGCAT-AGAGCAT-----GC 48131 ||| |||| | ||||| || || |||||||| || |||| || || Sbjct 165519 CTT------GGACG--GCTTGTTTGGATGGGC-GGTGCTTGAGATGAGAGAATAGGAGGC 165469 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | || || || |||| | ||||| || ||| |||||| ||||||||||| ||| | Sbjct 165468 ATGCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTC 165409 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||| ||||| || | || |||||||||||| |||| || ||||| ||||||||||||| Sbjct 165408 CAGCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGA 165349 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 | || || || || ||||| || ||| | | | || | || | |||| ||| | Sbjct 165348 TACCTTCAACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCAA 165289 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||| | ||||| || ||||| ||||| ||||| || Sbjct 165288 TCCATTTGACAGCCCAATCGGCCTTTTTCTTAATGCAAGG 165249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931525545688320