Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq9 176 8e-39
>seq9
Length=1212739
Score = 176 bits (194), Expect = 8e-39
Identities = 356/520 (68%), Gaps = 19/520 (4%)
Strand=Plus/Minus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
||||| || || ||||| ||||| |||||||| ||||| || |||| ||||||||||||
Sbjct 165757 TGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTCTCC 165698
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG-CCCATCTGTTCCAGCAG 47958
|||||| ||| ||||||| | || || || |||| |||| |||||||
Sbjct 165697 ATGAAGTCGAATGGGTTGGCAGACTTGTAGACTT-TGTCGTTACCCAAAGCAACCAGCAG 165639
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
|||| |||||| |||| ||||||| |||||| || ||||||||||| || ||
Sbjct 165638 ACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTTCATGCCTAAAAGAGA 165579
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
|| | ||||| || | || || | || || | |||||||| | | |
Sbjct 165578 GCAAGGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACGGCTTCGGTAATGACAT- 165520
Query 48079 CTTAACGCGGGACTCTGAGGGTTTGT-TGCGCAGGTGCTTGGCAT-AGAGCAT-----GC 48131
||| |||| | ||||| || || |||||||| || |||| || ||
Sbjct 165519 CTT------GGACG--GCTTGTTTGGATGGGC-GGTGCTTGAGATGAGAGAATAGGAGGC 165469
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
| || || || |||| | ||||| || ||| |||||| ||||||||||| ||| |
Sbjct 165468 ATGCGAAATCGGTGTGGAGACCTTCATCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTC 165409
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
||| ||||| || | || |||||||||||| |||| || ||||| |||||||||||||
Sbjct 165408 CAGCCATGAGACCACGCTTTTTGAGCCAGAAGATTGATGCAAAAGATCCAGAGAAGAAGA 165349
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311
| || || || || ||||| || ||| | | | || | || | |||| ||| |
Sbjct 165348 TACCTTCAACAGCGGCGAATGCAACGAGACGTTGAGCAAAGGTAGAGCTCTTATCTTCAA 165289
Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|||| | ||||| || ||||| ||||| ||||| ||
Sbjct 165288 TCCATTTGACAGCCCAATCGGCCTTTTTCTTAATGCAAGG 165249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931525545688320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |