Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq9 123 3e-23 >seq9 Length=1212739 Score = 123 bits (136), Expect = 3e-23 Identities = 170/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||||||| ||||| || || || || ||||| ||||| ||||| ||||||||||| || Sbjct 192140 ACACCAATTGGACCAACACCTGGTCCACCACCACCATGAGGAATGCAGAATGTCTTGTGA 192199 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || |||||||||||||| |||||| |||| ||| | || | || ||| Sbjct 192200 AGGTTAAGATGACATACATCGGCACCAATCTCACCAGGTGAACACAATCCAATTTGAGCA 192259 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| ||||| || | ||||| |||||||||| | |||||| || | |||| | Sbjct 192260 TTCATATTGGCACCGTCCATGTATACTTGACCACCATGTTGATGAACAATATCACAT-GC 192318 Query 138363 TGTCTGATGTT-TGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATA 138416 | || | || | ||||||||||||| || ||| ||||| ||||| ||| Sbjct 192319 AGCCTTAACTTCCGGTTCAAATACACCAAATGTACTTGGGTATGTGATCATGATA 192373 Score = 104 bits (114), Expect = 3e-17 Identities = 179/260 (69%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 ||||| |||| || || || ||||||||||| || ||| || || | || |||||| Sbjct 193286 AGTCCTTCTGGGCCGTGGTAAACTGCATAGAATGCACTCATGTTGGCCAACAATGCTTGA 193345 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || ||||| | ||||| || || || ||||| | ||||||||| ||||||||||||| Sbjct 193346 GCAGTGCACACATTACTAGTAGCCTTTTCTCTGCGAATATGCTGTTCTCTAGTTTGTAAA 193405 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || ||||| ||| || ||| || || || ||| | | | || || Sbjct 193406 GCCAATCTCATTGCTTTATCCCCTAGCCTATCTTTCGATACACCAATGAGACGTCCTGGG 193465 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 | |||||||||||||| || || ||||| |||||||| ||||| || || || Sbjct 193466 GTTTTTCTCTTATACTTATCGCCAACAGCGAAGAAAGCAGCATGGGGACCACCATAACCG 193525 Query 139500 ATAGGAATACCAAACCTTTG 139519 | |||| ||||| | ||| Sbjct 193526 AATGGAACTCCAAAACGTTG 193545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578993891049960