Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 233 2e-56 seq2 95.1 1e-14 seq9 93.3 5e-14 >seq3 Length=2126074 Score = 233 bits (258), Expect = 2e-56 Identities = 1165/1819 (64%), Gaps = 71/1819 (4%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204 ||||| || |||| ||||||||| || | |||||| ||| || ||||| | | Sbjct 692359 TACTTCGGGTTCAAGACCCTTGAGC-GATCATATCTTTTACGTCTTGATGGTAAAGTTGC 692301 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 ||| || || | ||| ||||||| || || | || || ||||| || || || || Sbjct 692300 GGAGCGTCCTCAACAAATGATCATGCGTGTTGCCGTGGGTATTCACGGTGATGATATCGA 692241 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAA 75323 || | || |||||| || |||||| | | ||| || | || || | |||| Sbjct 692240 AAGTGCTATCGAAACATACAACTTGATGTCAAACAAGTACTTT-ACACATGCTTCCCCAA 692182 Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 | ||||| ||| ||||| ||| | | || | || |||||||| |||| || | Sbjct 692181 CGCTCTTTTCTGCGGGTACTCCACAAGCACAACTTTCGTCGTGCTTCCTCATCGACATGA 692122 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443 | ||||| || | |||||||| | ||| | | | ||||| ||||||||| Sbjct 692121 AAGAGGATAGTATTGATGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGA 692062 Query 75444 GGGCTGGGGGTATTGGG------ATGCACA---TCCATGATGTGAGAGCCAATAAATCTC 75494 || || |||||||| || |||| ||| || | | || ||| ||| | Sbjct 692061 ATGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGC--ATACATCGC 692004 Query 75495 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 75554 || || ||||| | || |||||||| |||| |||||||| || || ||| Sbjct 692003 C-------GGTACTAATGGAAATTCCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACA 691951 Query 75555 CCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAG-----GGGTCCATC-GCGGTCT 75608 ||| || | ||||| |||| ||| || ||| |||| | | || || | Sbjct 691950 ACACTGCAAGATATGTTGATCA---GGGTGGTAACAAACGCCCGGGTGCTTTTGCTGTTT 691894 Query 75609 ACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTG 75668 || | || ||||||||||||||| | | ||||| ||||| |||| ||||| ||| Sbjct 691893 ACCTTGAGCCATGGCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAGAACCACGGTA 691834 Query 75669 ACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGA 75728 | ||||| | ||| | |||||||| | || |||||||||| || | ||||||| Sbjct 691833 AGGAAGAAGTTCGCGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGA 691774 Query 75729 AGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTG-TCCAGACAAGGCACCAGGTCTC 75787 |||| || || || ||| ||||| ||||| | || ||| || || || ||| | Sbjct 691773 AGCGTGTCGAAAAGAATGGAGAATGGACTCTTATGTGCCCCAATGAATGC-CCTGGTTTG 691715 Query 75788 TCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG-AGGGTAG 75846 | || | || ||||||||||| ||||||||| | |||||| ||| ||| || Sbjct 691714 GCAGATGTTTATGGCGAGGAGTTTGAGGCCCTCTACGAGAGTTATGAAAAGGCAGGAAAG 691655 Query 75847 AG--CCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGAC 75903 | ||| |||| | | || | | | | | ||| | ||||||| | | || || Sbjct 691654 GGTCGCAA---GACTAT-CAAGGCTCAAAAGCTCTGGTACTCTATTCTTGAGGCTCAAAC 691599 Query 75904 GGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAA 75963 || || |||| || | ||||||||||| ||||| || ||||||||||| |||||||| Sbjct 691598 CGAAACCGGAAATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAA 691539 Query 75964 GAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAA 76023 ||| | || || || ||||| || | ||||| || || | |||||| | | Sbjct 691538 GAACCTTGGTACTATTCGCAGCTCCAACTTGTGCACAGAGATCGTCGAGTACTCTGCACC 691479 Query 76024 GGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA--ATGAA 76081 |||||| ||| || || ||||| ||||| || || |||| | |||| ||||| Sbjct 691478 AGATGAGGTTGCTTGCTGTAACTTGGCTTCAATTGCTCTACCAACTTTCGTCAACATGAA 691419 Query 76082 -GAGACTCGCACTTTTGATTATGAAAAACTTCATGA-AATCACAAAGATTGTTACCAAAA 76139 ||| | |||| ||||| |||| ||||| || | | ||| | || | || Sbjct 691418 TGAG---GGAACTTATGATTTCCAAAAGCTTCACGAGGTTGTCCAAG-TGGTCGTTAGAA 691363 Query 76140 ATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATA 76199 | | ||| ||||||| | || | |||||| || | || ||| | ||| Sbjct 691362 ACTTGAACAAGATCATTGATATCAACTATTATCCAGTACAAGAAGCCAGAAGGAGCAATT 691303 Query 76200 TGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT--TTGTG 76257 | || || ||||||| | | | |||||||||||||| || |||| ||| || | | Sbjct 691302 TCCGTCATCGACCTATCGCTGTTGGTGTTCAAGGTCTTGCTGATG-CTTTCTTGGCTCTT 691244 Query 76258 CCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCAT 76317 | || | |||| || || ||||||||| | | || | || ||||| ||||| Sbjct 691243 CGTCTTC-CATTCGACTCGCCAGAAGCCAAGCACCTCAACATCCAGATTTTTGAGACCAT 691185 Query 76318 GTATCACGCATCCCTGGAGGCGAGTTGT-GAATTGGCTGAAGCCCAAGGTTCCTATGAGA 76376 || ||||| | ||| || | ||| || | || | | | || | || || | Sbjct 691184 CTACCACGC-TGCCTTGACCTCATCTGTCGAGATCGCAAAGGAACTTGGCCCGTACGAAA 691126 Query 76377 CATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAA 76436 | | | || ||||| | ||| | || | || || | ||| ||||||| || | Sbjct 691125 CTTACCAAGGCTCTCCAGTCTCCAAGGGTGAACTCCAATATGACATGTGGG-GCGTCACT 691067 Query 76437 CCAAGCTCA--ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCG 76494 || || | | || ||||| | | ||| || ||||||| | | || |||| Sbjct 691066 CC-TTCTGATTTGTGGGATTGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATTCG 691008 Query 76495 TAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAA 76554 ||| |||| | | ||||| ||||| || || ||| |||||||| | ||| || Sbjct 691007 CAACTCTCTTCTTGTTGCACCTATGCCTACTGCTAGCACTTCACAAATCCTCGGTTTCAA 690948 Query 76555 TGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTT 76614 ||||| |||||||||||||| ||||||||||| | | || || || || || Sbjct 690947 CGAATGTTTTGAACCATACACTTCAAACATCTACTCACGTCGTGTTCTGGCCGGAGAATT 690888 Query 76615 TGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGA 76674 |||| ||| ||| |||| ||||| | || ||||| ||||| | | Sbjct 690887 CCAAGTTGTTAACCCATGGCTCCTCAAAGACCTTGTTGATATGGGTCTTTGGTCTGACAA 690828 Query 76675 TATGAAGGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCC 76730 |||||| | | ||| || ||| ||||| || |||||||| ||| | | || | Sbjct 690827 CATGAAGAACCGTATCATTGCTGA----TGGTGGATCTATTCAAAACATCCCCAACATTC 690772 Query 76731 CAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCAT 76788 ||| ||| |||||| || ||| || || ||||||| || | ||| | | | Sbjct 690771 CAGCTGACATCAAGGCCCTTTACAAGACTGTTTGGGAAATTTCTCAACGAACAA--TTGT 690714 Query 76789 TGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCAT 76848 | | ||||| || ||||| ||| || || |||||| |||| ||||| | ||| Sbjct 690713 TCAAATGGCTGCTGATCGCGGTGCATTTATCGATCAATCTCAATCAATGAACATTCACAT 690654 Query 76849 GGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCT 76908 | | ||| || ||| |||| || | |||||||| | | |||||| ||| | Sbjct 690653 GAAGGATCCTACAATGGGCAAGATCACATCTATGCACTTTGCTGGATGGAAATTGGGTTT 690594 Query 76909 CAAAACCGGAATGTACTAT 76927 || ||||||||||||||| Sbjct 690593 GAAGACCGGAATGTACTAT 690575 >seq2 Length=2344949 Score = 95.1 bits (104), Expect = 1e-14 Identities = 171/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 27781 CCAGTAGATCCAAATCCACCCGCACCTCTCTCTGTCTCTTCAAGAACACCAATTTCCTGC 27840 |||||| ||| || || ||| |||| ||| | ||||||| | ||| | |||| Sbjct 1542388 CCAGTACTTCCGAAACCCCCCTCACCCCTCACACTCTCTTCCAAAACCAAGACTTCCGTG 1542329 Query 27841 ACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACC 27900 || || ||||| | | | ||| | | | ||||| || ||||| || | ||| ||| Sbjct 1542328 ACCTCAGGTGTATAAATCCTCTCCAAAATCAACTGTGCAATACGATCGCCCTCCTTCACC 1542269 Query 27901 TCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGA 27960 ||| | || || || ||||| || ||||| | ||| | |||| ||| |||| || | Sbjct 1542268 TCATAATCCTTTTCGCCGTGGTTAAAGAGGAGTACTCTTACTTGACCCCTATAATCAGCG 1542209 Query 27961 TCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCA 28020 ||||| ||||| |||||| | ||| |||||| ||||||||||| ||||| || Sbjct 1542208 TCAATTACACCGGCACCAGTATCAATCATATGCTTAGAGGCGAGACCGGAACGTGGGGCG 1542149 Query 28021 ACACGACCAT 28030 | || |||| Sbjct 1542148 ATGCGGCCAT 1542139 >seq9 Length=1212739 Score = 93.3 bits (102), Expect = 5e-14 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGC 65067 || || || ||| |||| ||||| | ||||| | |||||| |||| ||| | | Sbjct 165246 GTTCCTTGCATTAAGAAAAAGGCCGATTGGGCTGTCAAATGGATTGAAGATAAGAG-CTC 165304 Query 65068 T-CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 | |||| || | || || |||| || || ||| || |||||||||||||| || || Sbjct 165305 TACCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGATC 165364 Query 65127 ATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185 || ||| | || | ||| | || ||||| ||||||||| | || || |||||| | Sbjct 165365 -TTTTGCATCAATCTTCTGGCTCAAAAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCA 165423 Query 65186 ATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | ||||| || ||||| ||||| ||||||||| Sbjct 165424 ACGAACTCATCTCCCGTGATGAAGGTCTCCAC 165455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596564954214240