Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq3 233 2e-56
seq2 95.1 1e-14
seq9 93.3 5e-14
>seq3
Length=2126074
Score = 233 bits (258), Expect = 2e-56
Identities = 1165/1819 (64%), Gaps = 71/1819 (4%)
Strand=Plus/Minus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||| || |||| ||||||||| || | |||||| ||| || ||||| | |
Sbjct 692359 TACTTCGGGTTCAAGACCCTTGAGC-GATCATATCTTTTACGTCTTGATGGTAAAGTTGC 692301
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| || || | ||| ||||||| || || | || || ||||| || || || ||
Sbjct 692300 GGAGCGTCCTCAACAAATGATCATGCGTGTTGCCGTGGGTATTCACGGTGATGATATCGA 692241
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAA 75323
|| | || |||||| || |||||| | | ||| || | || || | ||||
Sbjct 692240 AAGTGCTATCGAAACATACAACTTGATGTCAAACAAGTACTTT-ACACATGCTTCCCCAA 692182
Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383
| ||||| ||| ||||| ||| | | || | || |||||||| |||| || |
Sbjct 692181 CGCTCTTTTCTGCGGGTACTCCACAAGCACAACTTTCGTCGTGCTTCCTCATCGACATGA 692122
Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443
| ||||| || | |||||||| | ||| | | | ||||| |||||||||
Sbjct 692121 AAGAGGATAGTATTGATGGTATCTACGATACTTTGAAGATTTGTGCCATGATCTCAAAGA 692062
Query 75444 GGGCTGGGGGTATTGGG------ATGCACA---TCCATGATGTGAGAGCCAATAAATCTC 75494
|| || |||||||| || |||| ||| || | | || ||| ||| |
Sbjct 692061 ATGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGC--ATACATCGC 692004
Query 75495 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 75554
|| || ||||| | || |||||||| |||| |||||||| || || |||
Sbjct 692003 C-------GGTACTAATGGAAATTCCAATGGTATTGTTCCCATGCTTCGAGTTTTCAACA 691951
Query 75555 CCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAG-----GGGTCCATC-GCGGTCT 75608
||| || | ||||| |||| ||| || ||| |||| | | || || |
Sbjct 691950 ACACTGCAAGATATGTTGATCA---GGGTGGTAACAAACGCCCGGGTGCTTTTGCTGTTT 691894
Query 75609 ACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTG 75668
|| | || ||||||||||||||| | | ||||| ||||| |||| ||||| |||
Sbjct 691893 ACCTTGAGCCATGGCATGCCGATGTTTTCGAGTTTCTTGATCTACGCAAGAACCACGGTA 691834
Query 75669 ACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGA 75728
| ||||| | ||| | |||||||| | || |||||||||| || | |||||||
Sbjct 691833 AGGAAGAAGTTCGCGCACGCGATCTCTTCTATGCCTTGTGGATTCCTGATTTGTTCATGA 691774
Query 75729 AGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTG-TCCAGACAAGGCACCAGGTCTC 75787
|||| || || || ||| ||||| ||||| | || ||| || || || ||| |
Sbjct 691773 AGCGTGTCGAAAAGAATGGAGAATGGACTCTTATGTGCCCCAATGAATGC-CCTGGTTTG 691715
Query 75788 TCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG-AGGGTAG 75846
| || | || ||||||||||| ||||||||| | |||||| ||| ||| ||
Sbjct 691714 GCAGATGTTTATGGCGAGGAGTTTGAGGCCCTCTACGAGAGTTATGAAAAGGCAGGAAAG 691655
Query 75847 AG--CCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGAC 75903
| ||| |||| | | || | | | | | ||| | ||||||| | | || ||
Sbjct 691654 GGTCGCAA---GACTAT-CAAGGCTCAAAAGCTCTGGTACTCTATTCTTGAGGCTCAAAC 691599
Query 75904 GGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAA 75963
|| || |||| || | ||||||||||| ||||| || ||||||||||| ||||||||
Sbjct 691598 CGAAACCGGAAATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAA 691539
Query 75964 GAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAA 76023
||| | || || || ||||| || | ||||| || || | |||||| | |
Sbjct 691538 GAACCTTGGTACTATTCGCAGCTCCAACTTGTGCACAGAGATCGTCGAGTACTCTGCACC 691479
Query 76024 GGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA--ATGAA 76081
|||||| ||| || || ||||| ||||| || || |||| | |||| |||||
Sbjct 691478 AGATGAGGTTGCTTGCTGTAACTTGGCTTCAATTGCTCTACCAACTTTCGTCAACATGAA 691419
Query 76082 -GAGACTCGCACTTTTGATTATGAAAAACTTCATGA-AATCACAAAGATTGTTACCAAAA 76139
||| | |||| ||||| |||| ||||| || | | ||| | || | ||
Sbjct 691418 TGAG---GGAACTTATGATTTCCAAAAGCTTCACGAGGTTGTCCAAG-TGGTCGTTAGAA 691363
Query 76140 ATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATA 76199
| | ||| ||||||| | || | |||||| || | || ||| | |||
Sbjct 691362 ACTTGAACAAGATCATTGATATCAACTATTATCCAGTACAAGAAGCCAGAAGGAGCAATT 691303
Query 76200 TGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT--TTGTG 76257
| || || ||||||| | | | |||||||||||||| || |||| ||| || | |
Sbjct 691302 TCCGTCATCGACCTATCGCTGTTGGTGTTCAAGGTCTTGCTGATG-CTTTCTTGGCTCTT 691244
Query 76258 CCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCAT 76317
| || | |||| || || ||||||||| | | || | || ||||| |||||
Sbjct 691243 CGTCTTC-CATTCGACTCGCCAGAAGCCAAGCACCTCAACATCCAGATTTTTGAGACCAT 691185
Query 76318 GTATCACGCATCCCTGGAGGCGAGTTGT-GAATTGGCTGAAGCCCAAGGTTCCTATGAGA 76376
|| ||||| | ||| || | ||| || | || | | | || | || || |
Sbjct 691184 CTACCACGC-TGCCTTGACCTCATCTGTCGAGATCGCAAAGGAACTTGGCCCGTACGAAA 691126
Query 76377 CATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAA 76436
| | | || ||||| | ||| | || | || || | ||| ||||||| || |
Sbjct 691125 CTTACCAAGGCTCTCCAGTCTCCAAGGGTGAACTCCAATATGACATGTGGG-GCGTCACT 691067
Query 76437 CCAAGCTCA--ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCG 76494
|| || | | || ||||| | | ||| || ||||||| | | || ||||
Sbjct 691066 CC-TTCTGATTTGTGGGATTGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATTCG 691008
Query 76495 TAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAA 76554
||| |||| | | ||||| ||||| || || ||| |||||||| | ||| ||
Sbjct 691007 CAACTCTCTTCTTGTTGCACCTATGCCTACTGCTAGCACTTCACAAATCCTCGGTTTCAA 690948
Query 76555 TGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTT 76614
||||| |||||||||||||| ||||||||||| | | || || || || ||
Sbjct 690947 CGAATGTTTTGAACCATACACTTCAAACATCTACTCACGTCGTGTTCTGGCCGGAGAATT 690888
Query 76615 TGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGA 76674
|||| ||| ||| |||| ||||| | || ||||| ||||| | |
Sbjct 690887 CCAAGTTGTTAACCCATGGCTCCTCAAAGACCTTGTTGATATGGGTCTTTGGTCTGACAA 690828
Query 76675 TATGAAGGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCC 76730
|||||| | | ||| || ||| ||||| || |||||||| ||| | | || |
Sbjct 690827 CATGAAGAACCGTATCATTGCTGA----TGGTGGATCTATTCAAAACATCCCCAACATTC 690772
Query 76731 CAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCAT 76788
||| ||| |||||| || ||| || || ||||||| || | ||| | | |
Sbjct 690771 CAGCTGACATCAAGGCCCTTTACAAGACTGTTTGGGAAATTTCTCAACGAACAA--TTGT 690714
Query 76789 TGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCAT 76848
| | ||||| || ||||| ||| || || |||||| |||| ||||| | |||
Sbjct 690713 TCAAATGGCTGCTGATCGCGGTGCATTTATCGATCAATCTCAATCAATGAACATTCACAT 690654
Query 76849 GGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCT 76908
| | ||| || ||| |||| || | |||||||| | | |||||| ||| |
Sbjct 690653 GAAGGATCCTACAATGGGCAAGATCACATCTATGCACTTTGCTGGATGGAAATTGGGTTT 690594
Query 76909 CAAAACCGGAATGTACTAT 76927
|| |||||||||||||||
Sbjct 690593 GAAGACCGGAATGTACTAT 690575
>seq2
Length=2344949
Score = 95.1 bits (104), Expect = 1e-14
Identities = 171/250 (68%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 27781 CCAGTAGATCCAAATCCACCCGCACCTCTCTCTGTCTCTTCAAGAACACCAATTTCCTGC 27840
|||||| ||| || || ||| |||| ||| | ||||||| | ||| | ||||
Sbjct 1542388 CCAGTACTTCCGAAACCCCCCTCACCCCTCACACTCTCTTCCAAAACCAAGACTTCCGTG 1542329
Query 27841 ACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACC 27900
|| || ||||| | | | ||| | | | ||||| || ||||| || | ||| |||
Sbjct 1542328 ACCTCAGGTGTATAAATCCTCTCCAAAATCAACTGTGCAATACGATCGCCCTCCTTCACC 1542269
Query 27901 TCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGA 27960
||| | || || || ||||| || ||||| | ||| | |||| ||| |||| || |
Sbjct 1542268 TCATAATCCTTTTCGCCGTGGTTAAAGAGGAGTACTCTTACTTGACCCCTATAATCAGCG 1542209
Query 27961 TCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCA 28020
||||| ||||| |||||| | ||| |||||| ||||||||||| ||||| ||
Sbjct 1542208 TCAATTACACCGGCACCAGTATCAATCATATGCTTAGAGGCGAGACCGGAACGTGGGGCG 1542149
Query 28021 ACACGACCAT 28030
| || ||||
Sbjct 1542148 ATGCGGCCAT 1542139
>seq9
Length=1212739
Score = 93.3 bits (102), Expect = 5e-14
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGC 65067
|| || || ||| |||| ||||| | ||||| | |||||| |||| ||| | |
Sbjct 165246 GTTCCTTGCATTAAGAAAAAGGCCGATTGGGCTGTCAAATGGATTGAAGATAAGAG-CTC 165304
Query 65068 T-CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
| |||| || | || || |||| || || ||| || |||||||||||||| || ||
Sbjct 165305 TACCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGATC 165364
Query 65127 ATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185
|| ||| | || | ||| | || ||||| ||||||||| | || || |||||| |
Sbjct 165365 -TTTTGCATCAATCTTCTGGCTCAAAAAGCGTGGTCTCATGGCTGGACTCACCTTCTCCA 165423
Query 65186 ATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
| ||||| || ||||| ||||| |||||||||
Sbjct 165424 ACGAACTCATCTCCCGTGATGAAGGTCTCCAC 165455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596564954214240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |