Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq18 100 5e-16
seq34 98.7 2e-15
>seq18
Length=877782
Score = 100 bits (110), Expect = 5e-16
Identities = 167/238 (70%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCT--CTTTAGAAATAT 193182
|||||| |||||| | | || || |||| ||||| || || | |||| ||| | |
Sbjct 575113 ATTTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGT-GCTTTCCTTTTGAA-TGT 575170
Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242
| || || | | ||||| || || || || ||||| || || || |||| |||||
Sbjct 575171 TGTAATCCAAAAGAGTTCTGCCGTCCTCCAACTGCTTTCCAGCGAAGATCAATCGCTGTT 575230
Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302
||||||| || || || || ||||| || || || | || | ||| ||||||||| |
Sbjct 575231 GATCAGGTGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTATCAATAGTATCCG 575290
Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||| || || |||| || ||||| || || || | || || ||||| ||||||||
Sbjct 575291 AAGATTCTACCTCTAATGTGATAGTCTTTCCAGTCAAGGTCTTAACAAAGATTTGCAT 575348
>seq34
Length=376069
Score = 98.7 bits (108), Expect = 2e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || |||||||| | || | ||| || | ||| |||||||| || || |||| |
Sbjct 166350 ATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGC 166409
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
||||| || || || ||||| || || ||||| || |||| || | ||| || ||
Sbjct 166410 TGTTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTG 166469
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| ||||||||||| || || || |||||||| || || || || || || || || |||
Sbjct 166470 TCCGAAGACTCAACCTCGAGGGTGATAGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGC 166529
Query 193359 AT 193360
||
Sbjct 166530 AT 166531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899647393941360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |