Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3 156 1e-32 seq13 111 5e-19 seq9 96.9 1e-14 seq6 96.9 1e-14 seq27 87.8 5e-12 >seq3 Length=2126074 Score = 156 bits (172), Expect = 1e-32 Identities = 711/1109 (64%), Gaps = 24/1109 (2%) Strand=Plus/Plus Query 155406 TCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTC 155465 || || | ||| ||||| |||| | ||| || ||||| | | |||||||||| || | | Sbjct 691260 TCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTCCTTCTGG-C 691318 Query 155466 TTCTTGTT-TGGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTT 155524 ||||||| ||| ||| | || | |||||| || || || || ||| |||| | || | Sbjct 691319 TTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTTCTAACGACCACTTG 691378 Query 155525 GGTTACGTC-TGCTAATTTCACATAGTCAAATGTTTTATCCT-CATTT--ACAAACATAC 155580 | || || || ||| | | ||| | ||| || | ||| | || || | Sbjct 691379 GACAACCTCGTGAAGCTTTTGGAAA-TCATAAGTTCCCTCATTCATGTTGACGAAAGTTG 691437 Query 155581 CAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGT-CGCTGTATTCTACA 155639 ||| |||| || |||| ||||| ||| ||| | | || | ||| || || Sbjct 691438 GTAGAGCAATTGAAGCCAAGTTACAGCAAGCAACCTCATC-TGGTGCAGAGTACTCGACG 691496 Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 ||||| ||||| ||| || || || || || | ||||| ||||| || || Sbjct 691497 ATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCTTCTTG 691556 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || ||||| ||||| || ||| | || |||| || || | || || || ||||| Sbjct 691557 TTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGTTTGAGCCTCAAGAATA 691616 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 |||||| | | || || || |||| | ||| || ||||| || Sbjct 691617 GAGTACCAGAGCTTTTGAGCCTTGATAGTCTTGCGACCCTTTCCTGCCTTTTCATAACTC 691676 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 || || | | ||||| || ||| ||| || |||||||| | || |||| Sbjct 691677 TCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAACCAGGGCATTCATTGGGG 691736 Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATACATCACTCGCCC 155937 || | || | ||| | ||| | || ||||||| ||| || | |||| || Sbjct 691737 CACATAAGAGTCCATTCTCCATT--CTTTTCGACACGCTTCATGAACAAATCAGGAATCC 691794 Query 155938 AAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCT 155997 | | |||||||| || || | ||| || || | ||||| ||||| ||||| | Sbjct 691795 ACAAGGCATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACCGTGGTTCTTGCGTAGAT 691854 Query 155998 CTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC 156057 | | || || || ||| | ||| |||||| || || | ||||||| ||| | Sbjct 691855 CAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCACCCGGGC 691914 Query 156058 TCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAA 156114 ||| ||||||||||| ||||| | ||||| || ||||| || | ||||| |||| Sbjct 691915 GTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTTGAAAACTCGAAGCATGGGAA 691974 Query 156115 TAATACCATTGGAAGTGCCATTGGTTCC-GCGA-ATATGCGAACCAGATGAGCGAACATT 156172 ||||||||||||| | ||||| || || |||| ||||| ||||| | || | | Sbjct 691975 CAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGC--ACCAGTAGCACGGATTCT 692032 Query 156173 ATGAATATGTAGTCCAATACCACCTGACCAT--TTAGAAATTTGAGCGCATTCCTTTACA 156230 ||||| | || ||||||||||| | ||| || || || || || ||| | | Sbjct 692033 GTGAATGTTGAGACCAATACCACCGG--CATTCTTTGAGATCATGGCACAAATCTTCAAA 692090 Query 156231 GTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAAT 156290 |||| | | ||||| |||||| ||| |||| ||| | || ||||||| | | Sbjct 692091 GTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAGCACGACGAAAGT 692150 Query 156291 TGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTA 156350 || | | |||| || || || || || || || | ||||| |||| ||||| || Sbjct 692151 TGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGTAAAGTACTTGTTT 692210 Query 156351 GACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAG 156410 ||||| | | |||||| || || | || | || | |||||||||| | | Sbjct 692211 GACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCGTGAATACCCACGGCA 692270 Query 156411 ACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTAT 156470 || | ||| ||| || ||||||||||| ||| ||||||| || | ||| ||| Sbjct 692271 ACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACCATCAAGACGTAAAAGATAT 692330 Query 156471 GCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 | || || || || || |||||||| || Sbjct 692331 GATCGCTCAAGGGTCTTGAACCCGAAGTA 692359 >seq13 Length=1013014 Score = 111 bits (122), Expect = 5e-19 Identities = 231/340 (68%), Gaps = 7/340 (2%) Strand=Plus/Plus Query 288892 TCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATA 288951 |||| |||||| || | || | |||||||| || || || || |||||||| Sbjct 829061 TCGGGTCTGTTGGTACCAGCAAGAACAACAATTTGCTCAGTCGTGTTGAAGCCATCCATC 829120 Query 288952 CTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC--TTGAAT-CA 289008 || ||||||||||| ||||| ||||| |||||| ||| ||| | |||| | Sbjct 829121 TCAGTCAAAATTTGATTGAGTGTAGCTTCCCGTTCATCGTTTCCACCCCCGGAGAATCCG 829180 Query 289009 CCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGA 289068 || || | || | || |||| |||||| || || |||||||| || | ||| ||| Sbjct 829181 CCAGACTTGCCACGAGACTTTCCAATAGCATCGATCTCATCAATGAATATGATACATGGA 829240 Query 289069 GAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATAC 289128 | | ||| ||| || || || || | || | || | |||||||||| |||||| || Sbjct 829241 GTACTTTTTCTTGCCATGGCGAAGAGGTCCCGGACTCTCGATGCTCCAACACCAACGAAC 829300 Query 289129 ATTTCTACAAATTCAGAA--GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTA 289186 || || || || |||||| | || ||| || ||||| ||| | | ||| || ||| Sbjct 829301 ATCTCGACGAACTCAGAACCACTGACACT--AAAGAATGGTACTTGCGATTCACCAGCTG 829358 Query 289187 CTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 ||| | || || | ||| ||||| || || ||||| || Sbjct 829359 TCGCCTTTGCTAGTAATGTTTTACCAGTACCTGGTGGACC 829398 Score = 96.9 bits (106), Expect = 1e-14 Identities = 173/253 (68%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | ||| | ||| || ||| ||||||| || | ||| ||| | Sbjct 74516 ATGAGTCCACAGATGTCACAGATATGAACTCTGAAAGCATCCGAAACCTCAAATAATCTC 74575 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| | ||||||||| ||||||||||||||||| ||||| || |||||| Sbjct 74576 TCCTTCAAGAACGCACTTGCACCGTGAGAAATCATACAATCACGTTCCATCTCTCCGAAA 74635 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586 ||||| ||||| || | ||| | ||| || |||| || | || | | | | ||| Sbjct 74636 CGAAGGCCACCGTCTCTAGCACGACCTTCTACAGGTTGCCTGGTTAAAATTTGTACCGGA 74695 Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646 || ||| ||| ||| ||| || | |||||||| | ||| ||||| ||| Sbjct 74696 CCTCTGGCACGGGCATGGATCTTGTCGTCGACCATATGGCGCAAACGTTGGTAATATGTA 74755 Query 251647 GGACCGATGAAGA 251659 ||||| | ||||| Sbjct 74756 GGACCAAGGAAGA 74768 >seq9 Length=1212739 Score = 96.9 bits (106), Expect = 1e-14 Identities = 328/505 (65%), Gaps = 6/505 (1%) Strand=Plus/Plus Query 133434 AATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTG 133493 || ||||||| ||||| || || | || |||||| | |||||||| | || ||| | Sbjct 165244 AAGTTCCTTGCATTAAGAAAAAGGCCGATTGGGCTGTCAAATGGATTGAAGATAAGAGCT 165303 Query 133494 CGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTG 133553 | | |||||| ||||||||||| || || | || || || || || ||| ||| Sbjct 165304 CTACCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGAT 165363 Query 133554 CGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCT 133612 | || ||| || || || ||||| |||||||||||| | | ||||||| || || Sbjct 165364 C-TTTTGCATCAATCTTCTGGCTCAAAAAGCGTGGTCTCATGGCTGGACTCACCTTCTCC 165422 Query 133613 AACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCT 133672 |||||||| || || | || || | || |||||||| || || | || |||| Sbjct 165423 AACGAACTCATCTCCCGTGATGAAGGTCTCCACACCGATTTCGCATGCCTCCTATTCTCT 165482 Query 133673 AAATTAGAGCGACCACTCAAAAAGAATAAG--ATTGAAGAAATTATTAGAGAAGCGGTTG 133730 | | ||| ||| | || | || ||| | |||| | |||| ||||| |||| Sbjct 165483 CATCTCAAGC-ACCGCCCATCCA-AACAAGCCGTCCAAGATGTCATTACCGAAGCCGTTG 165540 Query 133731 AAATTGAGGTTGAATTTATCAATAGTGCTCTGCCGTGCCGTTTAATTGGTATGAATGATG 133790 |||| || ||||| | | ||||| || ||| | | | || ||||| | Sbjct 165541 AAATCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGCTCTCTTTTAGGCATGAACTCTA 165600 Query 133791 TGCTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATTGGCCGTTCAGTTAGGTGGGG 133850 || ||| ||| || ||||| || || ||||| | || ||| || ||| | Sbjct 165601 CTCTCATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCTGGTTGCTTTGGGTAACG 165660 Query 133851 ATAAGATTTACGGTTCCGCCAATCCATTCGACTGGATGGAGAGCATTAGCATTGAATCAA 133910 | || | ||| || ||||| |||||||||| ||||||| ||| | | | | Sbjct 165661 ACAAAGTCTACAAGTCTGCCAACCCATTCGACTTCATGGAGAACATCTCCTTGGCTGGCA 165720 Query 133911 AGACTAATTTCTTCGAGGCGAGGGT 133935 |||| || ||||||||| ||| || Sbjct 165721 AGACCAACTTCTTCGAGAAGAGAGT 165745 >seq6 Length=1347266 Score = 96.9 bits (106), Expect = 1e-14 Identities = 181/264 (69%), Gaps = 8/264 (3%) Strand=Plus/Minus Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643 |||| | |||||| ||||||||||||||| | || || || || ||||| || | | Sbjct 903435 TTGACAAGACGACGTTGAATATAACCAGTTTCTGCAGTCTTAACCGCGGTATCGATCAAA 903376 Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAG 302703 || |||||||| |||| || |||||||| | |||| || || || | | | Sbjct 903375 CCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCTGTTGGGGTGAGACCTCTTAAGTAA 903316 Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763 ||| |||| || ||||| | || || ||||||| ||| |||||| || ||||| || Sbjct 903315 GAGTTCTCGACAAAACCTCTCGATTCTGGCGAATAATCGTCCTTGGTGAAATGTGGAAGA 903256 Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCA----G 302819 || | || | | ||| | || ||||| || || ||||| || || |||| | Sbjct 903255 GTACGGTATTTGAAACCGAAAGGAATACGTTTACCTTCAACAGATTGTTGGCCCACAAGG 903196 Query 302820 GCACGAAATCATCTGCGAAATATT 302843 ||| || |||||| |||||||| Sbjct 903195 GCA-GA---CATCTGAGAAATATT 903176 >seq27 Length=465286 Score = 87.8 bits (96), Expect = 5e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 |||||| | || ||| | |||||| | |||||||| || || |||||||||||||| | Sbjct 226151 TGCACCATATGCAATAAGACAATCTCTTTCCATTTCTCCCAATCGAAGACCACCATCTCT 226210 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || ||||| || | || || || |||||| || | ||||||| || || ||| Sbjct 226211 AGATCTACCTTCTGTGGGTTGGCGTGTGAGAATAGCGCGAGGACCGCGAGATCGAGAATG 226270 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 |||||| | ||||| |||||||| ||| ||| | ||||||| ||||| Sbjct 226271 CATCTTATCTTGAACCATGTGCTTGAGTTTCTGATAGTAGATTGGACCGAAGAAGA 226326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471805851675951