Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq3 156 1e-32
seq13 111 5e-19
seq9 96.9 1e-14
seq6 96.9 1e-14
seq27 87.8 5e-12
>seq3
Length=2126074
Score = 156 bits (172), Expect = 1e-32
Identities = 711/1109 (64%), Gaps = 24/1109 (2%)
Strand=Plus/Plus
Query 155406 TCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCTGCTTGTC 155465
|| || | ||| ||||| |||| | ||| || ||||| | | |||||||||| || | |
Sbjct 691260 TCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTCCTTCTGG-C 691318
Query 155466 TTCTTGTT-TGGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTT 155524
||||||| ||| ||| | || | |||||| || || || || ||| |||| | || |
Sbjct 691319 TTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTTCTAACGACCACTTG 691378
Query 155525 GGTTACGTC-TGCTAATTTCACATAGTCAAATGTTTTATCCT-CATTT--ACAAACATAC 155580
| || || || ||| | | ||| | ||| || | ||| | || || |
Sbjct 691379 GACAACCTCGTGAAGCTTTTGGAAA-TCATAAGTTCCCTCATTCATGTTGACGAAAGTTG 691437
Query 155581 CAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGT-CGCTGTATTCTACA 155639
||| |||| || |||| ||||| ||| ||| | | || | ||| || ||
Sbjct 691438 GTAGAGCAATTGAAGCCAAGTTACAGCAAGCAACCTCATC-TGGTGCAGAGTACTCGACG 691496
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
||||| ||||| ||| || || || || || | ||||| ||||| || ||
Sbjct 691497 ATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTTTTGGTTGCTCTTCTTG 691556
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|| || ||||| ||||| || ||| | || |||| || || | || || || |||||
Sbjct 691557 TTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTTTCGGTTTGAGCCTCAAGAATA 691616
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819
|||||| | | || || || |||| | ||| || ||||| ||
Sbjct 691617 GAGTACCAGAGCTTTTGAGCCTTGATAGTCTTGCGACCCTTTCCTGCCTTTTCATAACTC 691676
Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879
|| || | | ||||| || ||| ||| || |||||||| | || ||||
Sbjct 691677 TCGTAGAGGGCCTCAAACTCCTCGCCATAAACATCTGCCAAACCAGGGCATTCATTGGGG 691736
Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATACATCACTCGCCC 155937
|| | || | ||| | ||| | || ||||||| ||| || | |||| ||
Sbjct 691737 CACATAAGAGTCCATTCTCCATT--CTTTTCGACACGCTTCATGAACAAATCAGGAATCC 691794
Query 155938 AAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCT 155997
| | |||||||| || || | ||| || || | ||||| ||||| ||||| |
Sbjct 691795 ACAAGGCATAGAAGAGATCGCGTGCGCGAACTTCTTCCTTACCGTGGTTCTTGCGTAGAT 691854
Query 155998 CTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC 156057
| | || || || ||| | ||| |||||| || || | ||||||| ||| |
Sbjct 691855 CAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCACCCGGGC 691914
Query 156058 TCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAA 156114
||| ||||||||||| ||||| | ||||| || ||||| || | ||||| ||||
Sbjct 691915 GTTTGTTACCACCCTGATCAACATATCTTGCAGTGTTGTTGAAAACTCGAAGCATGGGAA 691974
Query 156115 TAATACCATTGGAAGTGCCATTGGTTCC-GCGA-ATATGCGAACCAGATGAGCGAACATT 156172
||||||||||||| | ||||| || || |||| ||||| ||||| | || | |
Sbjct 691975 CAATACCATTGGAATTTCCATTAGTACCGGCGATGTATGC--ACCAGTAGCACGGATTCT 692032
Query 156173 ATGAATATGTAGTCCAATACCACCTGACCAT--TTAGAAATTTGAGCGCATTCCTTTACA 156230
||||| | || ||||||||||| | ||| || || || || || ||| | |
Sbjct 692033 GTGAATGTTGAGACCAATACCACCGG--CATTCTTTGAGATCATGGCACAAATCTTCAAA 692090
Query 156231 GTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAAT 156290
|||| | | ||||| |||||| ||| |||| ||| | || ||||||| | |
Sbjct 692091 GTATCGTAGATACCATCAATACTATCCTCTTTCATGTCGATGAGGAAGCACGACGAAAGT 692150
Query 156291 TGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTA 156350
|| | | |||| || || || || || || || | ||||| |||| ||||| ||
Sbjct 692151 TGTGCTTGTGGAGTACCCGCAGAAAAGAGCGTTGGGGAAGCATGTGTAAAGTACTTGTTT 692210
Query 156351 GACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAG 156410
||||| | | |||||| || || | || | || | |||||||||| | |
Sbjct 692211 GACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCGTGAATACCCACGGCA 692270
Query 156411 ACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTAT 156470
|| | ||| ||| || ||||||||||| ||| ||||||| || | ||| |||
Sbjct 692271 ACACGCATGATCATTTGTTGAGGACGCTCCGCAACTTTACCATCAAGACGTAAAAGATAT 692330
Query 156471 GCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
| || || || || || |||||||| ||
Sbjct 692331 GATCGCTCAAGGGTCTTGAACCCGAAGTA 692359
>seq13
Length=1013014
Score = 111 bits (122), Expect = 5e-19
Identities = 231/340 (68%), Gaps = 7/340 (2%)
Strand=Plus/Plus
Query 288892 TCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATA 288951
|||| |||||| || | || | |||||||| || || || || ||||||||
Sbjct 829061 TCGGGTCTGTTGGTACCAGCAAGAACAACAATTTGCTCAGTCGTGTTGAAGCCATCCATC 829120
Query 288952 CTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC--TTGAAT-CA 289008
|| ||||||||||| ||||| ||||| |||||| ||| ||| | |||| |
Sbjct 829121 TCAGTCAAAATTTGATTGAGTGTAGCTTCCCGTTCATCGTTTCCACCCCCGGAGAATCCG 829180
Query 289009 CCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGA 289068
|| || | || | || |||| |||||| || || |||||||| || | ||| |||
Sbjct 829181 CCAGACTTGCCACGAGACTTTCCAATAGCATCGATCTCATCAATGAATATGATACATGGA 829240
Query 289069 GAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATAC 289128
| | ||| ||| || || || || | || | || | |||||||||| |||||| ||
Sbjct 829241 GTACTTTTTCTTGCCATGGCGAAGAGGTCCCGGACTCTCGATGCTCCAACACCAACGAAC 829300
Query 289129 ATTTCTACAAATTCAGAA--GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTA 289186
|| || || || |||||| | || ||| || ||||| ||| | | ||| || |||
Sbjct 829301 ATCTCGACGAACTCAGAACCACTGACACT--AAAGAATGGTACTTGCGATTCACCAGCTG 829358
Query 289187 CTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226
||| | || || | ||| ||||| || || ||||| ||
Sbjct 829359 TCGCCTTTGCTAGTAATGTTTTACCAGTACCTGGTGGACC 829398
Score = 96.9 bits (106), Expect = 1e-14
Identities = 173/253 (68%), Gaps = 0/253 (0%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| | | ||| | ||| || ||| ||||||| || | ||| ||| |
Sbjct 74516 ATGAGTCCACAGATGTCACAGATATGAACTCTGAAAGCATCCGAAACCTCAAATAATCTC 74575
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| ||| | ||||||||| ||||||||||||||||| ||||| || ||||||
Sbjct 74576 TCCTTCAAGAACGCACTTGCACCGTGAGAAATCATACAATCACGTTCCATCTCTCCGAAA 74635
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586
||||| ||||| || | ||| | ||| || |||| || | || | | | | |||
Sbjct 74636 CGAAGGCCACCGTCTCTAGCACGACCTTCTACAGGTTGCCTGGTTAAAATTTGTACCGGA 74695
Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646
|| ||| ||| ||| ||| || | |||||||| | ||| ||||| |||
Sbjct 74696 CCTCTGGCACGGGCATGGATCTTGTCGTCGACCATATGGCGCAAACGTTGGTAATATGTA 74755
Query 251647 GGACCGATGAAGA 251659
||||| | |||||
Sbjct 74756 GGACCAAGGAAGA 74768
>seq9
Length=1212739
Score = 96.9 bits (106), Expect = 1e-14
Identities = 328/505 (65%), Gaps = 6/505 (1%)
Strand=Plus/Plus
Query 133434 AATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTG 133493
|| ||||||| ||||| || || | || |||||| | |||||||| | || ||| |
Sbjct 165244 AAGTTCCTTGCATTAAGAAAAAGGCCGATTGGGCTGTCAAATGGATTGAAGATAAGAGCT 165303
Query 133494 CGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTG 133553
| | |||||| ||||||||||| || || | || || || || || ||| |||
Sbjct 165304 CTACCTTTGCTCAACGTCTCGTTGCATTCGCCGCTGTTGAAGGTATCTTCTTCTCTGGAT 165363
Query 133554 CGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCT 133612
| || ||| || || || ||||| |||||||||||| | | ||||||| || ||
Sbjct 165364 C-TTTTGCATCAATCTTCTGGCTCAAAAAGCGTGGTCTCATGGCTGGACTCACCTTCTCC 165422
Query 133613 AACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCT 133672
|||||||| || || | || || | || |||||||| || || | || ||||
Sbjct 165423 AACGAACTCATCTCCCGTGATGAAGGTCTCCACACCGATTTCGCATGCCTCCTATTCTCT 165482
Query 133673 AAATTAGAGCGACCACTCAAAAAGAATAAG--ATTGAAGAAATTATTAGAGAAGCGGTTG 133730
| | ||| ||| | || | || ||| | |||| | |||| ||||| ||||
Sbjct 165483 CATCTCAAGC-ACCGCCCATCCA-AACAAGCCGTCCAAGATGTCATTACCGAAGCCGTTG 165540
Query 133731 AAATTGAGGTTGAATTTATCAATAGTGCTCTGCCGTGCCGTTTAATTGGTATGAATGATG 133790
|||| || ||||| | | ||||| || ||| | | | || ||||| |
Sbjct 165541 AAATCGAACAAGAATTCTTGACCGAGGCTCTTCCTTGCTCTCTTTTAGGCATGAACTCTA 165600
Query 133791 TGCTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATTGGCCGTTCAGTTAGGTGGGG 133850
|| ||| ||| || ||||| || || ||||| | || ||| || ||| |
Sbjct 165601 CTCTCATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTGCTGGTTGCTTTGGGTAACG 165660
Query 133851 ATAAGATTTACGGTTCCGCCAATCCATTCGACTGGATGGAGAGCATTAGCATTGAATCAA 133910
| || | ||| || ||||| |||||||||| ||||||| ||| | | | |
Sbjct 165661 ACAAAGTCTACAAGTCTGCCAACCCATTCGACTTCATGGAGAACATCTCCTTGGCTGGCA 165720
Query 133911 AGACTAATTTCTTCGAGGCGAGGGT 133935
|||| || ||||||||| ||| ||
Sbjct 165721 AGACCAACTTCTTCGAGAAGAGAGT 165745
>seq6
Length=1347266
Score = 96.9 bits (106), Expect = 1e-14
Identities = 181/264 (69%), Gaps = 8/264 (3%)
Strand=Plus/Minus
Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643
|||| | |||||| ||||||||||||||| | || || || || ||||| || | |
Sbjct 903435 TTGACAAGACGACGTTGAATATAACCAGTTTCTGCAGTCTTAACCGCGGTATCGATCAAA 903376
Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAG 302703
|| |||||||| |||| || |||||||| | |||| || || || | | |
Sbjct 903375 CCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCTGTTGGGGTGAGACCTCTTAAGTAA 903316
Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763
||| |||| || ||||| | || || ||||||| ||| |||||| || ||||| ||
Sbjct 903315 GAGTTCTCGACAAAACCTCTCGATTCTGGCGAATAATCGTCCTTGGTGAAATGTGGAAGA 903256
Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCA----G 302819
|| | || | | ||| | || ||||| || || ||||| || || |||| |
Sbjct 903255 GTACGGTATTTGAAACCGAAAGGAATACGTTTACCTTCAACAGATTGTTGGCCCACAAGG 903196
Query 302820 GCACGAAATCATCTGCGAAATATT 302843
||| || |||||| ||||||||
Sbjct 903195 GCA-GA---CATCTGAGAAATATT 903176
>seq27
Length=465286
Score = 87.8 bits (96), Expect = 5e-12
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|||||| | || ||| | |||||| | |||||||| || || |||||||||||||| |
Sbjct 226151 TGCACCATATGCAATAAGACAATCTCTTTCCATTTCTCCCAATCGAAGACCACCATCTCT 226210
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
|| ||||| || | || || || |||||| || | ||||||| || || |||
Sbjct 226211 AGATCTACCTTCTGTGGGTTGGCGTGTGAGAATAGCGCGAGGACCGCGAGATCGAGAATG 226270
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659
|||||| | ||||| |||||||| ||| ||| | ||||||| |||||
Sbjct 226271 CATCTTATCTTGAACCATGTGCTTGAGTTTCTGATAGTAGATTGGACCGAAGAAGA 226326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471805851675951
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