Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 1e-10 >seq9 Length=1212739 Score = 86.0 bits (94), Expect = 1e-10 Identities = 174/253 (69%), Gaps = 8/253 (3%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || | | |||||| |||||||||||||| | | Sbjct 165771 TGACACCGGCCTTTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 165712 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG-CACCC- 794008 ||||| |||||| | ||| |||||||| | | |||| || ||| |||| Sbjct 165711 AGGAGATGTTCTCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCCA 165652 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 ||| | | ||||| || || |||||||| |||||||| || |||||| | | ||| Sbjct 165651 AAGCAA--CCAGCAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTT 165594 Query 794069 CATGCC--GATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACG 794126 |||||| | ||| || | || || | |||| | | || |||| ||||| || ||| Sbjct 165593 CATGCCTAAAAGAGAGCAA--GGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACG 165536 Query 794127 GCCTCGATGATGA 794139 || ||| | |||| Sbjct 165535 GCTTCGGTAATGA 165523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916180128648497