Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq9 86.0 1e-10
>seq9
Length=1212739
Score = 86.0 bits (94), Expect = 1e-10
Identities = 174/253 (69%), Gaps = 8/253 (3%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || | | |||||| |||||||||||||| | |
Sbjct 165771 TGACACCGGCCTTTTGGTAATCTCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 165712
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG-CACCC- 794008
||||| |||||| | ||| |||||||| | | |||| || ||| ||||
Sbjct 165711 AGGAGATGTTCTCCATGAAGTCGAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCCA 165652
Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
||| | | ||||| || || |||||||| |||||||| || |||||| | | |||
Sbjct 165651 AAGCAA--CCAGCAGACGATCAGCGACGAACTCAATGTATTGCTTCATGAGAGTAGAGTT 165594
Query 794069 CATGCC--GATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACG 794126
|||||| | ||| || | || || | |||| | | || |||| ||||| || |||
Sbjct 165593 CATGCCTAAAAGAGAGCAA--GGAAGAGCCTCGGTCAAGAATTCTTGTTCGATTTCAACG 165536
Query 794127 GCCTCGATGATGA 794139
|| ||| | ||||
Sbjct 165535 GCTTCGGTAATGA 165523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916180128648497
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |