Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq18 161 7e-34 seq6 125 5e-23 >seq18 Length=877782 Score = 161 bits (178), Expect = 7e-34 Identities = 460/699 (66%), Gaps = 6/699 (1%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 |||||||| || || || || ||||| ||||| | ||| | || | || | | || Sbjct 666250 ACAAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACC 666309 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || || |||| | |||||||| ||||| ||||| ||||| | ||| Sbjct 666310 TCGAAGATACCCTCCTCAATGGTCAAAAGAGAGACATCGAAAGTTCCTCCACCAAGATCG 666369 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || || || || || || || || || | ||| || |||| ||||| Sbjct 666370 AAGATGAGAACGTTACGCTCACCCTCAATCTTCTTGTCCAAACCGTAAGCAATGGCAGCT 666429 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 || || ||||| || || || | | ||| || ||||||||||| || ||||| || Sbjct 666430 GCGGTAGGTTCGTTGATGATACGGAGAACGTTGAGACCAGCAATGAGACCGGCATCCTTG 666489 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-AC 282480 || ||||| | |||||||||| | || || || || || || | ||||| | |||| || Sbjct 666490 GTAGCTTGACGTTGTGAATCGGTGAAGTAAGCTGGGACTGTGACGACGGCGT-TGTTGAC 666548 Query 282481 TTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAAT 282540 | ||||| ||||| ||||| | |||| || || ||||| || || || Sbjct 666549 GGTTCCTCCAAGGTAAGCCTCAGCTGTCTCCCTCATCTTGACCAAGATCATAGAAGAGAT 666608 Query 282541 TTGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTAT 282599 || |||||| | ||||||| | || |||| | | || || | | ||| || Sbjct 666609 TTCTTCTGGTGTGAATTGCTTAGTCTCGCCCTTGAACTCA-ACCTCGATAACTGGCTTTC 666667 Query 282600 TACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG-GTCA 282658 || | || || || || || | | |||||||| | |||||| || | || Sbjct 666668 CGGCACGGTCGATGACCTTGAAGGGGAAGTGCTTCATATCGGCTTGAAC-CTCAGCATCT 666726 Query 282659 TTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCA 282718 || | | |||||| || || || ||||| || | || ||| |||| || | || Sbjct 666727 GCGAACTTGCGACCAATCAAACGCTTAGCATCGAAGACGGTGTTGATTGGGTTCATGGCG 666786 Query 282719 GCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGAT 282778 |||| | ||||| |||||||| |||| | | || || ||||| || | ||| | || Sbjct 666787 ACTTGGTTCTTGGCGGCATCTCCGATCAAACGCTCGGTATCTGTGAAGGCAACGAAGGAA 666846 Query 282779 GGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACA 282838 || || || ||||| |||||||| || || |||||||| | | || ||| | | | | Sbjct 666847 GGTGTGGTACGATTTCCTTGATCGTTGGCGATAATTTCGATTCTATCATCACGGAAGATA 666906 Query 282839 CCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 282877 || ||||| | || || || ||||||||||||||| Sbjct 666907 CCCACACAGGAGTATGTGGTACCCAAATCAATACCAATA 666945 Score = 107 bits (118), Expect = 1e-17 Identities = 246/368 (67%), Gaps = 3/368 (1%) Strand=Plus/Plus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || || || ||||| | ||| || || || ||||||||||| || || | | |||||| Sbjct 665246 ATTCCGTTTGCATCAAGATCGAAGGTAACCTCAATTTGAGGAACACCACGTGGTGCAGGT 665305 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | ||| | |||| || || || || ||| || |||||| Sbjct 665306 GGGATACCAGTGAGCTCGAATTTACCCAAGAGGTTGTTGTCCTTGGTGCGTTGACGTTCA 665365 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 |||||||| | ||| || || ||| ||| || || || | || | || || | Sbjct 665366 CCCTCGAAGACTTGAATGAGGACACCAGGTTGGTTGTCGGAGAAGGTAGAGAAGACCTCG 665425 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || || || || || || |||||||| ||| | |||||||| |||||||| Sbjct 665426 GACTTCTTGGTTGGGATGGTGGTGTTTCTTGGAATGAGCTTGGTCATTTGTCCACCAGCA 665485 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 281738 || || | ||| ||||| | || | |||||| | |||| || | || | | || Sbjct 665486 GTCTCGATACCGAGAGACAATGGCGCGACATCGAGAAGGAGGATCTCGTTGGTGGACTTG 665545 Query 281739 CATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 | || | | |||| |||||||| || |||| |||||||| ||||||||||| ||| Sbjct 665546 GAGGAGGTGTCACCAGAGAGAATAGCAGCCTGAACGGCAGCACCGTATGCAACAGCCTCA 665605 Query 281798 TCAGGATT 281805 ||||| || Sbjct 665606 TCAGGGTT 665613 >seq6 Length=1347266 Score = 125 bits (138), Expect = 5e-23 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 432288 ggTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| ||||||||| | | |||||||||||||||||||||||||| | ||||| ||| Sbjct 901892 GGTAAGGAAGGTCGTCTCCGTGGAAATTTGATGGGAAAGCGTGTCGACTTTTCTGCTCGT 901951 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || ||||| ||| |||||| ||| | | || |||| ||||| ||||||| | ||| Sbjct 901952 ACCGTTATCACTGGTGATCCCAATCTCTCCCTAGATGAGGTTGGAGTTCCTCGAAGCATT 902011 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGATTATTTGACTCAA 432467 |||| || ||| || | | || | ||| ||| || || || ||| | ||| ||| Sbjct 902012 GCGAGAATTCTCACATATCCGGAGACTGTTACACCACTAAACATCGATAAATTGCATCAG 902071 Query 432468 TTAGTGAAAAATGGT--AAAAGAGTATATCCAGGTGCCAATTTTGTAATC 432515 | || ||||||||| | ||| |||| |||||||| | ||| ||| Sbjct 902072 CTTGTCAAAAATGGTCCCGATGAG--CATCCTGGTGCCAAGTATGTCATC 902119 Score = 95.1 bits (104), Expect = 9e-14 Identities = 133/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 || || |||||||| | |||||||||||||||||| | || |||| || |||| ||| Sbjct 903341 GAGTTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTTTGATCGATACCGCGGTTAAGACT 903400 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 || || ||||||||||||||| | |||||||| ||||| ||| ||| || Sbjct 903401 GCAGAAACTGGTTATATTCAACGTCGTCTTGTCAAAGCTCTTGAGGATGTTATGGCTAAA 903460 Query 435253 TATGATGGTACAGTGAGAAATGCAAATGGTAAACTTATATCA-TGTGTTTATGGTGATAA 435311 ||||||||||| || | || || |||| | || | ||| | || |||||||| | Sbjct 903461 TATGATGGTACTGTCCGTAACTCACTTGGTGACATTGT-TCAGTTCGTCTATGGTGAAGA 903519 Query 435312 TGGT 435315 |||| Sbjct 903520 TGGT 903523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740599813332798