Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq18 161 7e-34
seq6 125 5e-23
>seq18
Length=877782
Score = 161 bits (178), Expect = 7e-34
Identities = 460/699 (66%), Gaps = 6/699 (1%)
Strand=Plus/Plus
Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241
|||||||| || || || || ||||| ||||| | ||| | || | || | | ||
Sbjct 666250 ACAAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACC 666309
Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301
| ||| | || || |||| | |||||||| ||||| ||||| ||||| | |||
Sbjct 666310 TCGAAGATACCCTCCTCAATGGTCAAAAGAGAGACATCGAAAGTTCCTCCACCAAGATCG 666369
Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361
|| || || || || || || || || || | ||| || |||| |||||
Sbjct 666370 AAGATGAGAACGTTACGCTCACCCTCAATCTTCTTGTCCAAACCGTAAGCAATGGCAGCT 666429
Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421
|| || ||||| || || || | | ||| || ||||||||||| || ||||| ||
Sbjct 666430 GCGGTAGGTTCGTTGATGATACGGAGAACGTTGAGACCAGCAATGAGACCGGCATCCTTG 666489
Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-AC 282480
|| ||||| | |||||||||| | || || || || || || | ||||| | |||| ||
Sbjct 666490 GTAGCTTGACGTTGTGAATCGGTGAAGTAAGCTGGGACTGTGACGACGGCGT-TGTTGAC 666548
Query 282481 TTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAAT 282540
| ||||| ||||| ||||| | |||| || || ||||| || || ||
Sbjct 666549 GGTTCCTCCAAGGTAAGCCTCAGCTGTCTCCCTCATCTTGACCAAGATCATAGAAGAGAT 666608
Query 282541 TTGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTAT 282599
|| |||||| | ||||||| | || |||| | | || || | | ||| ||
Sbjct 666609 TTCTTCTGGTGTGAATTGCTTAGTCTCGCCCTTGAACTCA-ACCTCGATAACTGGCTTTC 666667
Query 282600 TACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG-GTCA 282658
|| | || || || || || | | |||||||| | |||||| || | ||
Sbjct 666668 CGGCACGGTCGATGACCTTGAAGGGGAAGTGCTTCATATCGGCTTGAAC-CTCAGCATCT 666726
Query 282659 TTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCA 282718
|| | | |||||| || || || ||||| || | || ||| |||| || | ||
Sbjct 666727 GCGAACTTGCGACCAATCAAACGCTTAGCATCGAAGACGGTGTTGATTGGGTTCATGGCG 666786
Query 282719 GCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGAT 282778
|||| | ||||| |||||||| |||| | | || || ||||| || | ||| | ||
Sbjct 666787 ACTTGGTTCTTGGCGGCATCTCCGATCAAACGCTCGGTATCTGTGAAGGCAACGAAGGAA 666846
Query 282779 GGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACA 282838
|| || || ||||| |||||||| || || |||||||| | | || ||| | | | |
Sbjct 666847 GGTGTGGTACGATTTCCTTGATCGTTGGCGATAATTTCGATTCTATCATCACGGAAGATA 666906
Query 282839 CCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 282877
|| ||||| | || || || |||||||||||||||
Sbjct 666907 CCCACACAGGAGTATGTGGTACCCAAATCAATACCAATA 666945
Score = 107 bits (118), Expect = 1e-17
Identities = 246/368 (67%), Gaps = 3/368 (1%)
Strand=Plus/Plus
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
|| || || ||||| | ||| || || || ||||||||||| || || | | ||||||
Sbjct 665246 ATTCCGTTTGCATCAAGATCGAAGGTAACCTCAATTTGAGGAACACCACGTGGTGCAGGT 665305
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560
||||| || | | ||| | |||| || || || || ||| || ||||||
Sbjct 665306 GGGATACCAGTGAGCTCGAATTTACCCAAGAGGTTGTTGTCCTTGGTGCGTTGACGTTCA 665365
Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620
|||||||| | ||| || || ||| ||| || || || | || | || || |
Sbjct 665366 CCCTCGAAGACTTGAATGAGGACACCAGGTTGGTTGTCGGAGAAGGTAGAGAAGACCTCG 665425
Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680
|| || || || || || |||||||| ||| | |||||||| ||||||||
Sbjct 665426 GACTTCTTGGTTGGGATGGTGGTGTTTCTTGGAATGAGCTTGGTCATTTGTCCACCAGCA 665485
Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 281738
|| || | ||| ||||| | || | |||||| | |||| || | || | | ||
Sbjct 665486 GTCTCGATACCGAGAGACAATGGCGCGACATCGAGAAGGAGGATCTCGTTGGTGGACTTG 665545
Query 281739 CATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797
| || | | |||| |||||||| || |||| |||||||| ||||||||||| |||
Sbjct 665546 GAGGAGGTGTCACCAGAGAGAATAGCAGCCTGAACGGCAGCACCGTATGCAACAGCCTCA 665605
Query 281798 TCAGGATT 281805
||||| ||
Sbjct 665606 TCAGGGTT 665613
>seq6
Length=1347266
Score = 125 bits (138), Expect = 5e-23
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 432288 ggTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| ||||||||| | | |||||||||||||||||||||||||| | ||||| |||
Sbjct 901892 GGTAAGGAAGGTCGTCTCCGTGGAAATTTGATGGGAAAGCGTGTCGACTTTTCTGCTCGT 901951
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| ||||| ||| |||||| ||| | | || |||| ||||| ||||||| | |||
Sbjct 901952 ACCGTTATCACTGGTGATCCCAATCTCTCCCTAGATGAGGTTGGAGTTCCTCGAAGCATT 902011
Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGATTATTTGACTCAA 432467
|||| || ||| || | | || | ||| ||| || || || ||| | ||| |||
Sbjct 902012 GCGAGAATTCTCACATATCCGGAGACTGTTACACCACTAAACATCGATAAATTGCATCAG 902071
Query 432468 TTAGTGAAAAATGGT--AAAAGAGTATATCCAGGTGCCAATTTTGTAATC 432515
| || ||||||||| | ||| |||| |||||||| | ||| |||
Sbjct 902072 CTTGTCAAAAATGGTCCCGATGAG--CATCCTGGTGCCAAGTATGTCATC 902119
Score = 95.1 bits (104), Expect = 9e-14
Identities = 133/184 (72%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
|| || |||||||| | |||||||||||||||||| | || |||| || |||| |||
Sbjct 903341 GAGTTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTTTGATCGATACCGCGGTTAAGACT 903400
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252
|| || ||||||||||||||| | |||||||| ||||| ||| ||| ||
Sbjct 903401 GCAGAAACTGGTTATATTCAACGTCGTCTTGTCAAAGCTCTTGAGGATGTTATGGCTAAA 903460
Query 435253 TATGATGGTACAGTGAGAAATGCAAATGGTAAACTTATATCA-TGTGTTTATGGTGATAA 435311
||||||||||| || | || || |||| | || | ||| | || |||||||| |
Sbjct 903461 TATGATGGTACTGTCCGTAACTCACTTGGTGACATTGT-TCAGTTCGTCTATGGTGAAGA 903519
Query 435312 TGGT 435315
||||
Sbjct 903520 TGGT 903523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740599813332798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |