Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq18 129 1e-24
>seq18
Length=877782
Score = 129 bits (142), Expect = 1e-24
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || || || | ||| |||||||| || || || || || |
Sbjct 575348 TACCACCACGAAGACGAAGGACCAAATGTAAAGTTGATTCTTTTTGGATGTTGTAGTCGG 575407
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| ||| || || || ||||| || ||||||||||| || | |||||| || || |
Sbjct 575408 AAAGAGTTCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCAGGTG 575467
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || || || ||||||||||| || || ||||| || || ||||| | || |
Sbjct 575468 GGATACCCTCTTTGTCTTGAATCTTAGCCTTCACATTGTCGATGGTATCCGACGACTCAA 575527
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || ||||| || ||||| || || | ||||| || || ||||||||
Sbjct 575528 CCTCTAAAGTGATTGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 575576
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
||||| || || |||||||| || ||||| || ||||| || || || | | ||| ||
Sbjct 575593 AGAACCAAATGGAGAGTAGACTCCTTCTGGATGTTATAGTCTGAGAGGGTACGACCATCC 575652
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| ||||| ||||| || || || | | |||||| || || || || || || || |||
Sbjct 575653 TCAAGTTGCTTTCCGGCGAAAATCAAACGTTGTTGGTCGGGTGGGATGCCCTCTTTGTCT 575712
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|||||||| ||||| || || || || |||||| || ||| || || | || || |||
Sbjct 575713 TGAATCTTGGCTTTGACGTTATCGATAGTATCAGAAGATTCAACCTCGAGGGTGATGGTC 575772
Query 82779 TTGCCTGTCAACGTCTTTACAAATAT 82804
|| || || | ||||| || | |||
Sbjct 575773 TTTCCGGTGAGGGTCTTAACGACTAT 575798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981819362871197
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |