Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq34 111 1e-19
seq18 87.8 1e-12
>seq34
Length=376069
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | | |||||||||||| || |||||| ||| ||||| |||||||| ||||
Sbjct 166303 CACCACCACGGAGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGG 166362
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| | || || | ||| |||||||| || ||||| ||||| || || | |
Sbjct 166363 AAAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTG 166422
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || || ||||| || || | | |||| ||| | |||||| || ||
Sbjct 166423 GAATTCCCTCCTTGTCTTGGATCTT-GGCCTTGACATTGTCGATGGTGTCCGAAGACTCA 166481
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| ||||| || || | || || || |||||||||||
Sbjct 166482 ACCTCGAGGGTGATAGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 166531
>seq18
Length=877782
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | |||||||||| ||| |||||||| |||||||| |||||
Sbjct 575349 ACCACCACGAAGACGAAGGACCAAATGTAAAGTTGATTCTTTTTGGATGTTGTAGTCGGA 575408
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || | || || | ||| || || ||||| || | ||| || || || | ||
Sbjct 575409 AAGAGTTCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGGTCAGGTGG 575468
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| |||||||| ||| || |||| ||| ||| | ||| || || || |
Sbjct 575469 GATACCCTCTTTGTCTTGAATCTTAGCCTTCA-CATTGTCGATGGTATCCGACGACTCAA 575527
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || | || || || ||||||||||||
Sbjct 575528 CCTCTAAAGTGATTGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCATA 575577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328701504212160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |