Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq34 98.7 2e-15
seq18 96.9 8e-15
>seq34
Length=376069
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || ||||| ||||| | || || || ||| |||
Sbjct 166528 CAGATCTTCGTCAAGACCCTCACGGGCAAAACTATCACCCTCGAGGTTGAGTCTTCGGAC 166469
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| ||||| || || |||||| || ||| ||
Sbjct 166468 ACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGACCAACAG 166409
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||||||||||||||| | || ||||| | || | |||| |||||| ||
Sbjct 166408 CGATTGATCTTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTTTCCGACTACAACATC 166349
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTT 206381
|| || ||||| ||||||||| | || ||
Sbjct 166348 CAAAAGGAGTCCACTCTTCACTTGGTGTT 166320
>seq18
Length=877782
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| ||||| || ||||| | || || ||| |||||| || ||||
Sbjct 575789 AAGACCCTCACCGGAAAGACCATCACCCTCGAGGTTGAATCTTCTGATACTATCGATAAC 575730
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| || ||||||||| ||||| || || || ||| ||| | | || ||
Sbjct 575729 GTCAAAGCCAA-GATTCAAGACAAAGAGGGCATCCCACCCGACCAACAACGTTTGATTTT 575671
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||||||||| | || ||||| | || | | || || ||| ||||||| |||||
Sbjct 575670 CGCCGGAAAGCAACTTGAGGATGGTCGTACCCTCTCAGACTATAACATCCAGAAGGAGTC 575611
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||| || | ||| | ||||||||
Sbjct 575610 TACTCTCCATTTGGTTCTCAGACTTCG 575584
Score = 86.0 bits (94), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| ||||| || |||||||| || || || || ||
Sbjct 575573 CAGATCTTCGTCAAGACTCTCACCGGAAAGACAATCACTTTAGAGGTTGAGTCGTCGGAT 575514
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||||||||| ||||| || || || ||| |||
Sbjct 575513 ACCATCGACAATGTGAAGGCTAAGATTCAAGACAAAGAGGGTATCCCACCTGACCAACAA 575454
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||| || || ||||| | || ||||| | ||| | |||| |||||| ||
Sbjct 575453 CGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGCCGAACTCTTTCCGACTACAACATC 575394
Query 206353 CAGAAAGAGTCTACT 206367
|| ||||| || |||
Sbjct 575393 CAAAAAGAATCAACT 575379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181811366484783
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |